Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3265 ATGAGACAGCGAACGAGTTTAACGCCGTTAAGGGAGTGGTTACTGACGGCAGGAAAACGGCGTCGCCGTTTTGTCGTGCATGGACGACACATGGCAGTCCCCCCCAAGAGCAGCAGAATCATTATAACAAGAAGGGATACTGATGTGGTAGACAAGCATGTGATGGGTGATGTTGTCACCAAGAAATACAAGATGGAGGAGCTAAATGATGATGATTCCTTGGAACTCTTTTGTTGGCATGCTTTCAACAGCAAGGAGCCTGCAGAGAACTTTGAAAATGTTTCAAGAAATGCAATAAGTTATGCAAAGGGCTTTCCACTTGCTTTAGAAGTAATAGGCTCCCATTTAGGGGAAACTTACTTGGACATTGCTTGTTTCTTCAAAGGAGAGAAATGGGAGTATGTTAAAAGGGTATTGAAAGCTTGCGACTTCTATCCAGTTCTTCGAGTGTTCATTAGTAAATGTCTTGTCACTGTAAATCAAAATGGCTGCTTGGAAATGCATGATCTAGTGCAAGACATGGGCAAGGAGATTGTAATGAGCGAGTCGCCAACAAACCCGGGTGAACGTAGCAGATTATGGTCTCCCAAGGACATTCTTCAAGTACTCAAAGATGACACAAATACAGAATTTTCAACAGGACCAAGTCATCTTCCAAATAGTTTACGAGTACTAGAGTGGAAAGGGTATCCATCAGAGTCATTCCCACTAGATTTTCAACCCCACAGAATTGTTGACCTCAAGCTACCACATAGTGCTCTTAAATTGGAAAGGCCATTTCAGGTATTTGAGGATTTGACATTTATCAATCTCTCTCAAAGTCAATCCGTTACTCAAGTTCCCAACATGTCTGGAGCTAAAAGCCTAAGAGTCCTCACACTTGACAAATGCAATAATCTGGTAGGATTTGATGAATCCATTGGATTTATGCCAAACCTTGTGTATTTGAGTGCTTCTGAATGCAGTAAGCTCAAACATTTCGTACCAGAAATGTATTTGCCTTCTCTCGAAGTGCTTTCGTTTTACTTTTGTAAAAGCCTCCAAAGCTTCCCAGAAATCATGCAAGAGATGGACAAACCATTAAAGATTAACTTGGCAAATTCTTCAATCGAGGAGTTCCCAAATTCCATTGGTAATCTTACAGGGCTTGAGCATATAGATATCTCTAGATCCAAAAGACTACAGTATCTACCAAGTAGCTTCTTGATGTTGCCAAAACTTTTCACATTGACAATAGACGGATGTTCTCTGCTTGGAAAATCATTTAAAAGGTTTAAAGGACACAGCAGTCCAAATATAAGGAGATTGAATTTCAGTGGTGCTAATCTATCAGATGAAGATCTTCATCCAATTCTTCAAGTTCTCCAAAAGTTGGAAGGCATCAATGTATCAAACAATTGTCTTTTTTCCCTCCTAAAATGCATTGAAGGATATTTGCACTTAAAAAGTCTTGATGTGAGTTATTGCAAGAATCTTATGCTAATTCCAGAACTTCCATCAAGCATTCAAAAAGTAGATGCAAGATATTGCCTATCCTTAACTCCACAGTCCTCAACCGTGCCGTGGTCCAAGATTTTACAAGAGACTAAAAGAATTGAAGTTGTGATGCCAAAAAAGGAGATTCCCAATTGGCTTGACTACAATTGCAGCGAAGATATTCCAATCTTTTGGGCTAGGCGAAAGTTCCCTGTTGTTGCTTTAGCATTCATTTTTGGAGGAGCCACTGGCAGTGATATTGATGAGACATTGACCAAGTATCTAGAATTCTGGCCTCAATTTGCTTCGTCCAAATCCTACACTGTTGGTCTCAACCTGTTTATAGTAGGCCAACAAATATTTCCAAAAGAGTCCAAATATTTCAATGTTGGGGAAGATCATGTGTTACTTTTCGATCTTCGAACTTTGTTCAGCGACGAAGAGTGGCATGATCTTGATGCATATATTGGAGATGATTGGAAAGCCATTCATGTTGTATGTGAATCAACCTTAACATTGAATCATTGGGGAGTTTATATTTACAAGGGAGAGACAAACATGGATGATATTTATTTCAAGCATTGTCCCGACCTCAATTCTAATAATAATGCGATTATTATTAAGGCAAAGAAGGACAGGCAACCATTTTTGAACACTACCAAGTGGGTTGAGGAGGTTCGCCAAGAACGCGGCACTGATGTTATTATTGTCTTGGTTGGAAACAAAACTGATCTTGTTGATAAGAGGCAAGTTTCTATAGAGGAAGGAGAGAGTTAG 2253 0.3968 MRQRTSLTPLREWLLTAGKRRRRFVVHGRHMAVPPKSSRIIITRRDTDVVDKHVMGDVVTKKYKMEELNDDDSLELFCWHAFNSKEPAENFENVSRNAISYAKGFPLALEVIGSHLGETYLDIACFFKGEKWEYVKRVLKACDFYPVLRVFISKCLVTVNQNGCLEMHDLVQDMGKEIVMSESPTNPGERSRLWSPKDILQVLKDDTNTEFSTGPSHLPNSLRVLEWKGYPSESFPLDFQPHRIVDLKLPHSALKLERPFQVFEDLTFINLSQSQSVTQVPNMSGAKSLRVLTLDKCNNLVGFDESIGFMPNLVYLSASECSKLKHFVPEMYLPSLEVLSFYFCKSLQSFPEIMQEMDKPLKINLANSSIEEFPNSIGNLTGLEHIDISRSKRLQYLPSSFLMLPKLFTLTIDGCSLLGKSFKRFKGHSSPNIRRLNFSGANLSDEDLHPILQVLQKLEGINVSNNCLFSLLKCIEGYLHLKSLDVSYCKNLMLIPELPSSIQKVDARYCLSLTPQSSTVPWSKILQETKRIEVVMPKKEIPNWLDYNCSEDIPIFWARRKFPVVALAFIFGGATGSDIDETLTKYLEFWPQFASSKSYTVGLNLFIVGQQIFPKESKYFNVGEDHVLLFDLRTLFSDEEWHDLDAYIGDDWKAIHVVCESTLTLNHWGVYIYKGETNMDDIYFKHCPDLNSNNNAIIIKAKKDRQPFLNTTKWVEEVRQERGTDVIIVLVGNKTDLVDKRQVSIEEGES* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3265 750 Pfam Ras family 696 749 IPR001806 GO:0003924|GO:0005525
Amo18g3265 750 SUPERFAMILY L domain-like 165 519 - -
Amo18g3265 750 Pfam NB-ARC domain 36 117 IPR002182 GO:0043531
Amo18g3265 750 Gene3D - 626 750 IPR027417 -
Amo18g3265 750 PRINTS Disease resistance protein signature 102 116 - -
Amo18g3265 750 PRINTS Disease resistance protein signature 284 300 - -
Amo18g3265 750 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 120 210 - -
Amo18g3265 750 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 38 113 - -
Amo18g3265 750 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 120 210 IPR044974 GO:0006952
Amo18g3265 750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 748 IPR027417 -
Amo18g3265 750 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 38 113 IPR044974 GO:0006952
Amo18g3265 750 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 213 671 IPR044974 GO:0006952
Amo18g3265 750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 141 IPR027417 -
Amo18g3265 750 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 213 671 - -
Amo18g3265 750 Gene3D Ribonuclease Inhibitor 199 361 IPR032675 -
Amo18g3265 750 Gene3D Ribonuclease Inhibitor 362 533 IPR032675 -
Amo18g3265 750 Gene3D - 67 152 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3265 Amo-Chr18 133568655 133572863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3265 120 438 WRKY Transcription Factor Family AT4G12020 32.353 1.38e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3265 - - aip:107611494 1190.64