Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3246 ATGTCTCTGCTTCTCCAAGTGTTCCTCCTCCTGATATGTGCTTCGCCATCTCTCCCCGCCAAGACCACAGAGCTTGAAGCTCTCATGACCATCAAACAATCTCTTGACCCACAAAACCGTGTGCTGACTTCGTGGACCCCACACTCCGACCCATGTAGCAGTTTCCCTGGTCATTTTGAGGGCGTGGCTTGCAACCAACAAGGTCTTGTAGTGAATATCTCACTGCAAGGAAAGGGTCTCTCTGGAAGCATACCTGCCGCCATTTCTAGTCTTAAGAGCTTGACTGGTCTCTATCTTCACTTCAACTCTCTCACTGGAATTTTACCCAAGGAGATTTCCTCCTTGACTCACCTCACTGACTTGTATCTCAATGTCAATTCTCTCTCTGGTGATATCCCTCGTCAGATTGCCAACCTCTCTAATCTTCAAGTTTTGCAGATTAGCTATAACGAGTTCAGTGGCGGTGTACCTTCTGAACTAGAGAAGTTGAAGAAGCTTAGCGTTCTTTCACTGCAATATAATCAATTATACGGCGCAATTCCAGCAAGTTTGGGTGAATTGGACTCACTAACACGATTAGATCTGAGCTTCAACCAATTTTTCGGTCCAATCCCAGTGAGTTTGGGTTATGCACCCAAACTGCAGATTCTAGATGTTCGAAACAATTCTCTCTCGGGGAATATCCCTAAAGCACTAGAAAGACTTAAAGRTGGATTCCAGTACATGAACAATCCTGGTTTATGTGGAACCGGATTCGCTGATTTATCTCCTTGTAGAGCAGTAATCAGTTCAGACCCGGTCAGACCGGAACCATAYGAGCCTGGTAATCTTTCTTCAGAAGTTCTTCCAACGACGGTTCAACCAAAAGATATAAAGCCATCAAAACCATCGAATATCGGTTTGGTTTTCGCGGTAATTGCAGTTACTTTTGCTTCAACCATCTTTGGCCTGTTTATAGTGCTATGGTATCGGCATCAGAAATTGAAAATTGGAAGCACTGCTAACACTACTAACAAGATGAAGGAAGCACGCAGGAAAATTTCATCTCCTCTGATAAATTTGGAGTACTCCAATGGATGGGATCCCTTAGCCAAAGGTCAAAGTGGTTATTCCCAGGAATTCCTAGAGAGCTTAATGTTCAATGTTGAAGATGTGGAACGCGCAACACAGTGTTTCTCAGAGCTAAATTTGTTGGGGAAGGGTGAGTTTTCTACTATATACAGGGGAATATTGAGAGATGGATCYGTTGTGGTRGTAAAGTGCATTGCGAAAACAAGCTGCAAGCCTGATGAAACAGAGTTCTTGAAAGGGTTGAAGATATTGACTTCACTGAGGCATGAAAATCTGGTTCGGTTGAGAGGCTTTTGCTGTTCCAAGAGCCGTGGGGAGTGTTTTCTGGTCTATGATTTTATCCCGAATGGGAGTTTGTTACGGTGCCTTGACGATGCTAAAGTTCTTGAATGGTCCACAAGAGTATCCATCATCCATGGCATTGCTAAAGGTATTGCTTATCTGCATGGAAAAAAGGGAAGCAAAGGCGGTCTACTTCACCAGAATTTATCAGCCGATACAGTGCTTCTAGATGCCCGGTACAATGCGGTTCTTGCATATTCGGGATTGCACAAGCTTCTGGCAGACGACGTCGTCTTCTCCACCCTCAAAGCTAGTGCAGCCATGGGATATCTGTCTCCGGAATACACGAAAACAGGTCGTCTAACCGAGAAGAGTGATGTGTATGCATTTGGAGTGATTGTTTTCCAGCTTCTTAGTGGTAAACGTGACATCACTCAGTTAAGTCGCCAGGCGGTACAAGTTGATGACAAACTTGAAGGGAAGTTCTCGGAATCAGAGGCCGCGAAACTCTGGGGAGTTGCTCTGCTTTGCACCCACGAATCTCCTCATCTCCGACCATATATGGAAGATGTGATTCAAGAACTCTGCGACTAA 1947 0.4468 MSLLLQVFLLLICASPSLPAKTTELEALMTIKQSLDPQNRVLTSWTPHSDPCSSFPGHFEGVACNQQGLVVNISLQGKGLSGSIPAAISSLKSLTGLYLHFNSLTGILPKEISSLTHLTDLYLNVNSLSGDIPRQIANLSNLQVLQISYNEFSGGVPSELEKLKKLSVLSLQYNQLYGAIPASLGELDSLTRLDLSFNQFFGPIPVSLGYAPKLQILDVRNNSLSGNIPKALERLKXGFQYMNNPGLCGTGFADLSPCRAVISSDPVRPEPYEPGNLSSEVLPTTVQPKDIKPSKPSNIGLVFAVIAVTFASTIFGLFIVLWYRHQKLKIGSTANTTNKMKEARRKISSPLINLEYSNGWDPLAKGQSGYSQEFLESLMFNVEDVERATQCFSELNLLGKGEFSTIYRGILRDGSVVVVKCIAKTSCKPDETEFLKGLKILTSLRHENLVRLRGFCCSKSRGECFLVYDFIPNGSLLRCLDDAKVLEWSTRVSIIHGIAKGIAYLHGKKGSKGGLLHQNLSADTVLLDARYNAVLAYSGLHKLLADDVVFSTLKASAAMGYLSPEYTKTGRLTEKSDVYAFGVIVFQLLSGKRDITQLSRQAVQVDDKLEGKFSESEAAKLWGVALLCTHESPHLRPYMEDVIQELCD* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3246 648 ProSiteProfiles Protein kinase domain profile. 392 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g3246 648 SUPERFAMILY L domain-like 22 236 - -
Amo18g3246 648 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Amo18g3246 648 Gene3D Ribonuclease Inhibitor 139 255 IPR032675 -
Amo18g3246 648 Gene3D Phosphorylase Kinase; domain 1 364 470 - -
Amo18g3246 648 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 646 - -
Amo18g3246 648 Gene3D Transferase(Phosphotransferase) domain 1 472 648 - -
Amo18g3246 648 Pfam Protein tyrosine and serine/threonine kinase 396 646 IPR001245 GO:0004672|GO:0006468
Amo18g3246 648 ProSitePatterns Protein kinases ATP-binding region signature. 398 424 IPR017441 GO:0005524
Amo18g3246 648 SUPERFAMILY Protein kinase-like (PK-like) 369 646 IPR011009 -
Amo18g3246 648 Pfam Leucine rich repeat N-terminal domain 23 65 IPR013210 -
Amo18g3246 648 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 646 - -
Amo18g3246 648 Pfam Leucine Rich Repeat 213 235 IPR001611 GO:0005515
Amo18g3246 648 Gene3D Ribonuclease Inhibitor 23 138 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3246 Amo-Chr18 133243361 133247209 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3246 3 501 Miscellaneous Gene Families AT4G22730 45.849 3.93e-153 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Amo18g3246 PK_Tyr_Ser-Thr 2.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3246 - - adu:107495059 1253.81