Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3244 ATGGAATCACAAGAGACATCTTCAATAGGAGCAGAAGCACTTCTACATATGTCTCCTGGATCAGCGGTTTCTGTTGCATACCACCCTCTGTTTGGACCGCATGATGATCTGATCGTTCTAGAGCTTGATGATAAACTTCTTCCCGATGTTCTGCATGAAAGGGTGGTAATAAGAGGACTGCCCGATGAAGACGCAGTTCTTTGTACTCAATCCAAAACATTTGCAATGAAGTTCGTTGGAACTTCAAATTCTGTTTTGCTTATACCTCCTGCAAATCAATATGTTTTTGATCAAAATCCACAAAATGGTGCAAATAATCACAAGGAGAAAGTTGTTGCACCTGTGATTAAAGTTGTACCTGGTAATATGGAGCTTGTTGAGGTTGCCCCCAGACTTGACAAACTTAAATTGCTCCTCTCGCAGAACCCTTGCAGGCTTGAAGAGTTTGACAGTTCAGAAGTGAATCCAGAAACTAGAGCAGGGTTATATAACTGGAAGGATCTTAAAAACAATATTCAAGCTAGTGACGAGGAACTAAGATCCGGACTGCAGGCACTATCGGCTGTGGAGATTAATAGCTATTGGAGACTAGTAGACGAGAGATACATGAACATGATTCTGGAAATGGTTTTGAGAAATGCAGTGTTAAACGACTGGTCACTGAGTGCTCTTAATGAAGATGAAGTCGTAAGCATGCTGGTTACCGATGGATTTCCTGCAGAACTTGCAAGGCATTGCTTGCACGTATATGGTGAGAAAGTAATTGACGGCACGGATACCTGTGCATGGAAGTTAGACAAGAAGCGGGTTTGCATTCATTTTGCGAGAGAAATCCTGAGAGGGGGCAAGATGAAGCTGGAGAGTTTTATGGATGAGTGGAGGCAGAGGACTCCAGATGAAATGCAGCCAACTTTTGATCTTGTCGAAGGAGAAGTTTTGACAGAGAGAATTGGAGTCGAGACATGGGTCCGTGGATTCAGCGTCTCTTCGTTGCCATCCACTCCGGCTGAACGATTCTCGATTCTTTTCAAAGAGCGGCCAAAATGGGAATGGAAAGATCTGCAGCCTTATATTAGGGATCTGAATGTGCCAGGTCTTACTTCTGAAGGTTTGCTATTGAAATACACTCGAAGAACACAACCATCACCTGAAATAGAACCAATTTTCAGTGCAAGATAG 1179 0.4309 MESQETSSIGAEALLHMSPGSAVSVAYHPLFGPHDDLIVLELDDKLLPDVLHERVVIRGLPDEDAVLCTQSKTFAMKFVGTSNSVLLIPPANQYVFDQNPQNGANNHKEKVVAPVIKVVPGNMELVEVAPRLDKLKLLLSQNPCRLEEFDSSEVNPETRAGLYNWKDLKNNIQASDEELRSGLQALSAVEINSYWRLVDERYMNMILEMVLRNAVLNDWSLSALNEDEVVSMLVTDGFPAELARHCLHVYGEKVIDGTDTCAWKLDKKRVCIHFAREILRGGKMKLESFMDEWRQRTPDEMQPTFDLVEGEVLTERIGVETWVRGFSVSSLPSTPAERFSILFKERPKWEWKDLQPYIRDLNVPGLTSEGLLLKYTRRTQPSPEIEPIFSAR* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3244 392 Pfam Sister chromatid cohesion protein Dcc1 39 358 IPR019128 GO:0007064|GO:0031390
Amo18g3244 392 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 6 392 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3244 Amo-Chr18 133227694 133232302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3244 10 392 C3H Transcription Factor Family AT2G44580 56.010 1.03e-160 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3244 K11271 - gmx:100817511 595.89