Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3219 ATGGCTATCCCTCTGGTGGTTACCATTCTCTTGGCCTTAGCCTCCACCATAACGCCGCGGACGACCTCGGCCGCGTTCGTCCCCCGAGACAACTACCTGATCGATTGTGGCTCGGAAACCGGAACCACCCTCCCAGACGGAAGAACATTCAAATCAGACCCACAAGCCAACACTTACTTGCAAGCCAATGATCAAAACAAGGTATCAATAGAAAATGGCAATAATAACCCTGATCTCCCAAATCCATTGTACTCGAGTGCAAGAATCTTCATGCAAGAAGCCAAGTACTCCTTCCATTTAATCCAACCGGGTTACCATTGGGTTCGCCTTTATTTCTACCCAATCAAGAACAATATCTTTGATCTCCAAAAAGCCACTTTCTCCGTCAACGCCTATAAATACGTTCTTCTCCATAGCTTCAATGTTAACAACAATGACAAGCCAATTCTCAAGGAGTACCTCATTAATGCAAACGAACCCATCTTCACGCTCTCTTTTACTCCGTTGAAGAACTCAGCTGCATTTATCAATGCCATAGAAATCGTATCCGTCCCGGACAACCTTCTATTCGACTCCGGCTCGAACCTTTTCCCGGTCGGCGATTACTCCGGCCTGACTAACCACGCTTTCCAGCCGGTTTACAGGATCAACAACGGCGGACCTCTTGTKACCGCMACAAACGACACTTTAGGACGGAATTGGGAGAACGACGAGCCTTATATAACGGTGAAGAACGCAGCCATGAGTGTCGTTGTACCTACAAACATTATCAAYTACCCTACGAATAATCCAAATATCTCTCCTCTTATTGCTCCGCCGACGGTTTACGCCTCGGCGACGGAGATGACTAACGACTCTGCAGTGGATCAGCCGAATTTCAATATAACTTGGAAGTTTGATGTGGATACTTCTTTTAGCTACCTTGTAAGGTTGCATTTCTGCGACATTGTAAGCAAAGGTTTGAACGAGCTTTACTTCAACGTCTACATCAACGAGAAAACCGCGATTCCGACGCTTGATTTGTCCAGCATTACGCAAGCCTTGGCGACTCCTTATTACAGAGATTTTGTTGTGAATGCGACGTTGATGTCTCAGGAAGGACTAAAGATTCAGGTGGGAGCGTCGCTGGCGCGAGGAGGAAGCGGGAACGCTATCGTGAATGGGATAGAGATCTTGAAGATAAGTAACTCTTTGGACAGTTTGGATGGCCAATTCGGCCTTGATGGGAGCAATGGCGGTGGTYGCTCTTACCGCGGCGCYGTGGCCGGGGTTGGATTCGCGATGATGTTTGGAGCGTTTGTTGGACTTGGCGCCATGGTGATCAAGTGGCACAAGAGGCCTCAAGATTGGCAGAAACGYAACAGTTTTTCGTCGTGGTTGCTTCCGGTGCACGCCGGAGARAGTACCTTTATGAGCAAGAATGCGTCAGGYAAGAGCAATTTCTCTGCCACTATGGGTTTAGGCCGGTTCTTCTCTTTGGCGGAGCTGCAAGAYGCAACTAATAACTTCGATAAAGCAAACATTATCGGTGTTGGTGGATTCGGCAATGTGTATTCCGGCGTCATTGATGATGCGACTCAAGTTGCGGTGAAGAGAGGAAATCCGCAATCGGAACAGGGGATTAACGAATTCCAGACSGAGATTCAAATGTTGTCTAAGCTTAGGCACAGGCATTTGGTMTCTCTTATTGGATACTGCGACGAAAACGATGAAATGATTTTGGTTTATGAGTACATGCCTAATGGACACTTRAGGGACCATCTTTATGGCAAGAACATGGTCGGACCACCGCTTTCTTGGAAGCAAAGATTGGAAATCTGTATCGGAGCTGCTCGCGGTCTTCATTATCTTCACACCGGCACGGCACAAGGTATCATCCATCGCGATGTTAAGACAACTAACATATTGCTTGACGAGAATTTCACGGCCAAGGTTTCTGATTTTGGTTTATCAAAGGATGCACCTATGGGGCAGGGTCATGTCAGTACGGCGGTTAAGGGTAGTTTTGGGTATTTGGATCCTGAATACTTCAGGAGACAACAATTGACAGAAAAATCRGATGTCTATTCATTTGGAGTGGTGCTTCTTGAGGCCTTATGTGCAAGGCCTGCTATTAATCCTCAGTTACCCCGCGAACAAGTKAACTTGGCTGATTGGGCTATGCAATGGAAGAGAAAGGGATTGCTTGATAAGATCATTGATCCTAATCTTGTCGGCACCATTAACCCCGAATCGTTGAAGAAGTACGCCGAGGCGGCCGAGAAGTGCTTGGCMGATCATGGTGTTGATAGGCCTTCAATGGGAGATGTGCTTTGGAATTTAGAGTATGCTTTGCAGCTTCAAGAGGCCTTCACACAAGAAGGAAAGGCAGAGGATGAGACTCCGGCTGTCCCAGCCTCAGCCTCAGCCTCAGCCTCAGCCTCGGCTGTTCTGCCTCCGGCCGCTCCTGCGTCTTCTAATGCCTTAGATGAGGCTGTCCCTGTTCCAGAAGGAAATAACCCCCCGGCCGAAACCCGGGCGATTGATGACCATTCTGGAACTTTGCAGTTTGCTAGGTTTAGCCTTAATGGCAGGTGA 2577 0.4765 MAIPLVVTILLALASTITPRTTSAAFVPRDNYLIDCGSETGTTLPDGRTFKSDPQANTYLQANDQNKVSIENGNNNPDLPNPLYSSARIFMQEAKYSFHLIQPGYHWVRLYFYPIKNNIFDLQKATFSVNAYKYVLLHSFNVNNNDKPILKEYLINANEPIFTLSFTPLKNSAAFINAIEIVSVPDNLLFDSGSNLFPVGDYSGLTNHAFQPVYRINNGGPLVTATNDTLGRNWENDEPYITVKNAAMSVVVPTNIINYPTNNPNISPLIAPPTVYASATEMTNDSAVDQPNFNITWKFDVDTSFSYLVRLHFCDIVSKGLNELYFNVYINEKTAIPTLDLSSITQALATPYYRDFVVNATLMSQEGLKIQVGASLARGGSGNAIVNGIEILKISNSLDSLDGQFGLDGSNGGGXSYRGAVAGVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPVHAGESTFMSKNASGKSNFSATMGLGRFFSLAELQDATNNFDKANIIGVGGFGNVYSGVIDDATQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPNGHLRDHLYGKNMVGPPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPNLVGTINPESLKKYAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQEGKAEDETPAVPASASASASASAVLPPAAPASSNALDEAVPVPEGNNPPAETRAIDDHSGTLQFARFSLNGR* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3219 858 ProSiteProfiles Protein kinase domain profile. 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g3219 858 SMART serkin_6 503 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g3219 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Amo18g3219 858 Pfam Protein tyrosine and serine/threonine kinase 507 703 IPR001245 GO:0004672|GO:0006468
Amo18g3219 858 Pfam Malectin-like domain 34 393 IPR024788 -
Amo18g3219 858 PANTHER BNAC03G60370D PROTEIN 17 827 - -
Amo18g3219 858 PANTHER OS07G0166700 PROTEIN 17 827 IPR045272 GO:0004714|GO:0006468
Amo18g3219 858 CDD STKc_IRAK 509 775 - -
Amo18g3219 858 MobiDBLite consensus disorder prediction 812 847 - -
Amo18g3219 858 Gene3D Transferase(Phosphotransferase) domain 1 579 798 - -
Amo18g3219 858 SUPERFAMILY Protein kinase-like (PK-like) 479 775 IPR011009 -
Amo18g3219 858 Gene3D - 210 396 - -
Amo18g3219 858 Gene3D - 31 184 - -
Amo18g3219 858 Gene3D Phosphorylase Kinase; domain 1 466 578 - -
Amo18g3219 858 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3219 Amo-Chr18 132782083 132785069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3219 25 858 Receptor kinase-like Gene Family AT4G39110 64.566 0.0 1099
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Amo18g3219 Malectin_like 5.1e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3219 - - gmx:100790759 1301.19