Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3165 ATGTATCATTTTTTCTTAGGAGCTTCTCAAGGACCCTATGACTTCTCAAGATACATCAGCAGTGCCAAATACAGAAGTAAATGCATATGTGCAGTTAGGGTTTGGAATAGGGACCAATCATCCTACATATCTTTAGTATATTCTATCACTTGGTTTCACATGTTAGTAAATTCCATGTGGAGAGAAGCTTTCATGAAGGCGTATAAGGCCATGGACAAAGAGCTAAGGTCTCATCCGAATCTGGATTGTTTCTGTAGTGGGAGCACGGCTGTAACCATAGTGAAGCAGGGATCAAATCTGTTCATGAGCAACATAGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCGGTTGACAATTGATTTGAAACCTGATTTGCCAAGGGAAGCTGAAAGAATCAAAAGGTGCAAGGGCAGGGTATTTGCCTTGCAAGATGAACCAGAAGTTCCAAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGCGATTTTTGTTTGAAGGATTACGGTGTCATTTCTATACCAGAATTTTCTTACCGGCTTCTTACAGACAAAGACGAGTTCATTGTTCTTGCCTCGGATGGAGTCTGGGATGTGTTAAGCAATGAAGAYGTGGTTGAGATAGTATCCACGGCACRAACTCGAGCATCAACAGCAAGGGTTCTYGTGGATTCTGCAGCCCGAGAGTGGAAACTCAAGTATCCCACGTCAAAGATGGATGATTGTGCTGTTGTATGCCTTTTTTTGGATGGTAAAATGGATGTGGAATCTGATTGTGATGAGCAATGCTATTCTTCTGCAACAATCCAAAGCAACCATTCGGGTAATCCAGTTGAGTCCGATGATGGTCAAAAGGCCGAGCCTTCTTTGCAAAGGAACTTCACTGATGGAGCTTCAGCAGCAGTAGCAGCTGAAGATCAAAATTGGTCGGGTCTGGAAGGTGTCACCCGAGTAAACTCATTGGTCCAACTTCCTAGATTTTCTGAGGAAAAGCAAAAGCAAGCCTCATAG 1056 0.4366 MYHFFLGASQGPYDFSRYISSAKYRSKCICAVRVWNRDQSSYISLVYSITWFHMLVNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMSNIGDSRAIMGSKDSNDSMVAIRLTIDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISIPEFSYRLLTDKDEFIVLASDGVWDVLSNEDVVEIVSTAXTRASTARVLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDVESDCDEQCYSSATIQSNHSGNPVESDDGQKAEPSLQRNFTDGASAAVAAEDQNWSGLEGVTRVNSLVQLPRFSEEKQKQAS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3165 351 SUPERFAMILY PP2C-like 47 266 IPR036457 -
Amo18g3165 351 ProSiteProfiles PPM-type phosphatase domain profile. 1 264 IPR001932 -
Amo18g3165 351 MobiDBLite consensus disorder prediction 285 316 - -
Amo18g3165 351 Pfam Protein phosphatase 2C 62 241 IPR001932 -
Amo18g3165 351 PANTHER - 57 314 - -
Amo18g3165 351 CDD PP2Cc 45 264 IPR001932 -
Amo18g3165 351 Gene3D - 32 271 IPR036457 -
Amo18g3165 351 PANTHER ALPHABET, ISOFORM E-RELATED 57 314 - -
Amo18g3165 351 SMART PP2C_4 15 262 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3165 Amo-Chr18 131216319 131219140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3165 56 348 PP2C-type Phosphatase Gene Family AT1G03590 72.381 1.28e-157 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3165 - - adu:107477895 520.39