Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3161 ATGGAAACGAGTCCCAGCCGTACGATTAAGCTCCTCTGCAGCTACGGCGGAAAGATCCTCCCACGTGCTACCGACGGCGGGCTCCGTTTCATCGGTGGCCACACCAGAGTCACCTGTTCCTCGTTTTTTTTCTGTGATTGTTCATTAACTGTTTATGTTTTGCGTTGTGCTGACTTGTTGGTAAAGGTAGGAGCGTTGTGCGGTTCGTCTGTGACATTACGGTGTCAATTGCCGAACGAAGACTTAGAAACCTTGATCTCCCTCACCAACAACGAAGATCTGACGCACATAAGCAAAGAATATGACCGCGCTTCGTCGAAACTACCTCATCCGTTGAATATCAGAGCCGTGCTGTTTCGGCCAGAATCGTCGAAGAAGGTTTCTCCGGCAACGTCGTCTCCGTTGAAGAAGTTGAAGATGACACTTAACATAATCGGAAATATTTAA 447 0.481 METSPSRTIKLLCSYGGKILPRATDGGLRFIGGHTRVTCSSFFFCDCSLTVYVLRCADLLVKVGALCGSSVTLRCQLPNEDLETLISLTNNEDLTHISKEYDRASSKLPHPLNIRAVLFRPESSKKVSPATSSPLKKLKMTLNIIGNI* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3161 148 PANTHER PB1 DOMAIN PROTEIN 5 135 - -
Amo18g3161 148 SUPERFAMILY CAD & PB1 domains 56 127 - -
Amo18g3161 148 PANTHER OS05G0427100 PROTEIN-RELATED 5 135 - -
Amo18g3161 148 SMART PB1_new 23 119 IPR000270 GO:0005515
Amo18g3161 148 Pfam PB1 domain 55 107 IPR000270 GO:0005515
Amo18g3161 148 Gene3D - 52 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3161 Amo-Chr18 131125456 131125964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3161 9 129 MAP Kinase Kinase Kinase AT1G04700 41.322 3.19e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3161 - - aip:107611558 248.054