Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3154 ATGGCTTCTTCAAATTCACCATGCGCAGCATGCAAATTTCTTCGAAGAAAATGCCAACCAGAGTGCGCTTTTGCACCATACTTCCCACCAGATCAGCCTCAGAAGTTCGCGAATGTTCATAGAATCTTYGGTGCAAGCAATGTTACRAAGCTTCTCAACGATYTACACCCTCACCAGCGCGAAGACGCCGTGAATTCCCTYGCGTACGAGGCGGAGATGCGCCTTCGCGACCCGGTCTATGGTTGCGTCGGCGTYATCTCCCTCCTCCAGCACCAGCTCCGGCARCTYCAGGTGGATCTTTACTGCGCTAAATCGGAGCTATCTAGGTACCAAAATTTGAGTATCAACRCCAACCACGCCTTCGTTGGTAGTGAATCTGGTGCCGTGGGATACCARCAYCAGCAGAAYAATAATTCTGGTTCTGCTGGTRTTGGAACCCGCGACAACARYAGTTACTACCAACACCATCACCATCACCACCACCATCAGTTCTTTCCGCAACAACAGATTGTAAGAAGTTTTGATGGAGGGAGCAATTATGATGCTAGTCTCTTGGCTATGAACATCTCCGCTAGCTTAGGGCAGCTCAATCAGCTTCCGGCTGGCGGCGGTGACGACCGCCGCACCGTCAACAACCCTTCCTAG 645 0.5008 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQVDLYCAKSELSRYQNLSINXNHAFVGSESGAVGYQHQQNNNSGSAGXGTRDNXSYYQHHHHHHHHQFFPQQQIVRSFDGGSNYDASLLAMNISASLGQLNQLPAGGGDDRRTVNNPS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3154 214 MobiDBLite consensus disorder prediction 128 148 - -
Amo18g3154 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 181 - -
Amo18g3154 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 181 - -
Amo18g3154 214 MobiDBLite consensus disorder prediction 126 166 - -
Amo18g3154 214 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Amo18g3154 214 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3154 Amo-Chr18 130987728 130988372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3154 2 214 AS2 family AT1G65620 60.000 6.45e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo18g3154 LOB 3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3154 - - gmx:100819502 331.257