Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3118 ATGGCTGTCCCATCATCACCGGAATCCCTTGTGTTTACCGTGCGGAGGGGTAAGGAGGAGCTTGTGGCTCCGGCGAAACCCACGCCTCGCGAAGTGAAACTACTCTCAGACATAGACGACCAAGAAGGGCTCCGTTTTCAAATTCCAGTGATACAATTTTATCGTAGTGATCCATCGATGGAAGGGAAGGACCCTGTCCTCATCATTAGAAAGGCTGTGGCCGAAGCACTGGTGTTTTATTACCCTTTTGCTGGCAGGCTTAGGGAAGGGCCTGCTCGGAAACTAATGGTGGACTGCACCGGCGAGGGTGTTCTCTTTGTTGAGGCCGACGCTGACGTCACGCTTACCCAATTCGGGGATGCTCTTCAGCCTCCATTTCCATGTTGGGAGGAGCTCCTTTATGATGTTCCGGGCTCTGCACAAGTTCTCAACACTCCCTTGATCCTTATTCAGGTAACACGGCTGAAGTGTGGTGGATTCATTTTTGCATTGAGGCTAAACCACACCATGAGTGATGCAGCGGGGTTAGTCCAGTTCATGAATACAGTGGCCGAAATTGCACGTGGGGCACGTGAGCCTTCGGTGCAACCTGTGTGGCGGAGAGACCTCTTGAACGCAAGAGTACCGCCAAGAATTACATGCAACCATCGAGAGTATGAGCAAGTCCCCGACACCAAGGGAACCATAATCCCGTTGGACGACATGGCCCACCGTTCCTTCTTCTTCGGTCCCAGCGAGCTCTCCGCCATCCGCCGCCTCCTCCCTCCCCATCAACAGCGCTGCTCCGACTTTGAGATACTTACAGCTTGCTTATGGCGGTGGCGCACGATCGCTCTACAGCCGGAGAACGAAGAAGAGGTTCGCATAATCTGTATCGTGAATGCACGCGGCAAGTTCAACCCTCCGTTACCTACTGGTTACTACGGTAATGCCTTTGCGTTCCCTGTGGCTGTGACGAGTGCGGGCAAGTTGCGAGAGAACCCGCTGGGATATGCCGTTGACCTGGTGAGGAAGGCGAAGGCGGATGTGACGGAGGAGTACATGCACTCAATAGCGGATTTGATGGTGTTGAAGGGGCGGCCGCATTTTACTGTGGTGAGGTCATACTTGGTGTCGGATGTCACCCGAGCTGGGTTCGGAGAGGTGGACTTTGGGTGGGGGAGGGCTGCTTATGGTGGGCCCGCCAAAGGGGGTGTTGGAGCCATTCCTGGTGTGGCCAGCTTTTACATTCCCTTTACCAATGCCAAGGGAGAGCACGGTTTGGTCATACCTATCTGTTTACCATCGGAAGCCATGGATCGATTTGTTCAAGAGTTGGAAACCATCCTTAACAACTCTCACCGTGTTACTGTAACCTCTGCCTCTCGTTTTATCTCTTCTTCCTTATAG 1389 0.5335 MAVPSSPESLVFTVRRGKEELVAPAKPTPREVKLLSDIDDQEGLRFQIPVIQFYRSDPSMEGKDPVLIIRKAVAEALVFYYPFAGRLREGPARKLMVDCTGEGVLFVEADADVTLTQFGDALQPPFPCWEELLYDVPGSAQVLNTPLILIQVTRLKCGGFIFALRLNHTMSDAAGLVQFMNTVAEIARGAREPSVQPVWRRDLLNARVPPRITCNHREYEQVPDTKGTIIPLDDMAHRSFFFGPSELSAIRRLLPPHQQRCSDFEILTACLWRWRTIALQPENEEEVRIICIVNARGKFNPPLPTGYYGNAFAFPVAVTSAGKLRENPLGYAVDLVRKAKADVTEEYMHSIADLMVLKGRPHFTVVRSYLVSDVTRAGFGEVDFGWGRAAYGGPAKGGVGAIPGVASFYIPFTNAKGEHGLVIPICLPSEAMDRFVQELETILNNSHRVTVTSASRFISSSL* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3118 462 Pfam Transferase family 17 440 - -
Amo18g3118 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 449 - -
Amo18g3118 462 Gene3D - 220 439 IPR023213 -
Amo18g3118 462 Gene3D - 13 219 IPR023213 -
Amo18g3118 462 PANTHER - 11 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3118 Amo-Chr18 130318169 130320426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3118 21 442 Monolignol Biosynthesis Gene Families AT5G48930 30.296 2.95e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3118 K19861 - gmx:100797017 767.689