Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3115 ATGGATGAAAAGCGCCGAACCGTCGCGTCCCTTGTATCGAAGCTAAGCTCCGTATCCGAACGAACCCGAATCGACGCGCTCATCGAGCTCCGTCAGATGTCGAAGCTCGACCCGGAAACCCGCCCCATAATTGCCGAAGCTGGCGCCATCCCTTTCCTCGCTGAAACACTCTACTCTTCCTCTCATCCTTCCCAAGAAAACGCCGCCGCCACGCTCTTAAACCTTTCCATCTCCGCAAAGGAACCGTTGGTTTCCACGCGCGGTGTCCTCGACGCCATAGCGCACGTGATCTCCCACCACAGCTCCTCCTCCTCCGCCTCCGCCGTCCAATCCGCCGCAGCCACAATCCACAGCCTCCTCGCCGCCACCGACGACTACCGCCCCTCTGTCGGCGCCAAGCGCGACATCGTCTACGCGCTTGTGGACATCCTCCGGTGCCACGTGTCGTCCCCTCCGAGAACCATCAAAGACGCGCTGAAGGCGCTGTTCGGCATTGCGCTGTACCCTCCGAACCGCGCCACGATGGTGCATCTTGGAGTGATCCCCGCGCTTTTCGCCCTTGTGGTGAAGGACGGGCGCGTGGGGATCGTCGAGGACACCACCGCGGTGATCGCGCAAGTAGCCGGGTGCGAGGAGAGCGGTGAGGCCTTCCGGAAGGTCGCCGGGGTTGGGGTTCTCGCTGATCTCCTCGACCTGTCTACCGGCGCCAGTATGCGAAGCAAGGAGAATGCCGTCTCGGCGTTGCTGAATTTGGCGCGGTGCGGTGGCGAGAGCGTTGTGGCAGAGGTCAGGGAGGCGCTTACGGATATTGCGGCCAATGGGATCGATGATGTCGAGGATAATGGAAGCGCCAAGGGGAAGAACAAAGCAAAGTTGTTGAAGGTTTTGTTTGGTGATGATGATGTTAACGATGATAACAGTAGCAACAGCGTTTTGAGTTCGGGTGGAGGTTCGCAGTTTGATTCATTCTAG 972 0.5947 MDEKRRTVASLVSKLSSVSERTRIDALIELRQMSKLDPETRPIIAEAGAIPFLAETLYSSSHPSQENAAATLLNLSISAKEPLVSTRGVLDAIAHVISHHSSSSSASAVQSAAATIHSLLAATDDYRPSVGAKRDIVYALVDILRCHVSSPPRTIKDALKALFGIALYPPNRATMVHLGVIPALFALVVKDGRVGIVEDTTAVIAQVAGCEESGEAFRKVAGVGVLADLLDLSTGASMRSKENAVSALLNLARCGGESVVAEVREALTDIAANGIDDVEDNGSAKGKNKAKLLKVLFGDDDVNDDNSSNSVLSSGGGSQFDSF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3115 323 PANTHER U BOX DOMAIN-CONTAINING 2 306 - -
Amo18g3115 323 SUPERFAMILY ARM repeat 7 271 IPR016024 -
Amo18g3115 323 Pfam Armadillo/beta-catenin-like repeat 37 76 IPR000225 GO:0005515
Amo18g3115 323 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 306 - -
Amo18g3115 323 Gene3D - 1 278 IPR011989 -
Amo18g3115 323 SMART arm_5 37 77 IPR000225 GO:0005515
Amo18g3115 323 SMART arm_5 168 209 IPR000225 GO:0005515
Amo18g3115 323 SMART arm_5 210 253 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3115 Amo-Chr18 130187314 130189054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3115 1 297 U-box Gene Family AT2G23140 31.438 9.88e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3115 - - mtr:MTR_8g039560 417.157