Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3108 ATGGCTGACGCCAGTCCTAGGACTGATATCTCTACAGATGTTGACACTGATGACAAAAATCAGCGGTCTGATAGAGGTGCCCTTGTTCCTGTGGCTTCTGACTCAAGTGACAGATCAAAGGATAAAACCGATCAGAAGAGTCTTCGCAGGCTTGCTCAAAATCGTGAGGCTGCCAGAAAAAGCCGGCTGAGAAAAAAAGCCTATGTGCAACAGCTGGAAAGTAGTCGTTTGAAGCTGACCCAGCTAGAGCAAGAGCTTCAGCGAGCCAGGCAACAGGGAATCTTCATATCAAGCTCGGGTGATCAAGCGCATTCAATGAGTGGCAATGGAGCAATGCAGTTCGATGCTGAATATGCTAGGTGGCTGGAAGAGCAGAATCGACAAGTTAATGAGCTTAGAGCAGCTGTAAATTCGCATGCAGGCGATACTGAACTTCGAATGATTGTTGATGGTGTAATGGCACATTATGATGAAATTTTTAGGCTGAAAGGCATTGCAGCTAAGGCTGATGTTTTCCACTTGCTGTCTGGGATGTGGAAAACACCTGCTGAGAGGTGCTTTTTGTGGCTTGGTGGTTTTCGGTCATCTGAACTCCTCAAGCTCCTGGTAAGTCAATTGGAACCTCTCACAGAGCAGCAGCTATTGGGTATTACAAACTTGCAGGAGTCCTCTCAGCAAGCAGAAGATGCATTATCTCAAGGCATGGAAGCATTGCAACAATCCCTTGCTGAGACATTGTCCACCGGATCACAAAATTCATCTGGTTCCTCAGGGAATGTGGCAAATTACATGGGTCAAATGGCAATGGCCATGGGTAAGCTAGGGACACTTGAGGGGTTTATTCGACAGGCTGACAATCTGCGCCAGCAAACTCTACAGCAAATGCATCGTATTCTAACAACTCGCCAATCAGCTCGTGCACTCCTTGCAATACATGACTACTTTTCCCGGCTGCGTGCCCTTAGTTCACTCTGGCTGGCCCGCCCAAGAGATTAA 996 0.4749 MADASPRTDISTDVDTDDKNQRSDRGALVPVASDSSDRSKDKTDQKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMSGNGAMQFDAEYARWLEEQNRQVNELRAAVNSHAGDTELRMIVDGVMAHYDEIFRLKGIAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLLGITNLQESSQQAEDALSQGMEALQQSLAETLSTGSQNSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3108 331 MobiDBLite consensus disorder prediction 35 58 - -
Amo18g3108 331 SUPERFAMILY Leucine zipper domain 46 89 IPR046347 GO:0003700|GO:0006355
Amo18g3108 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 44 88 IPR004827 GO:0003700|GO:0006355
Amo18g3108 331 Coils Coil 122 142 - -
Amo18g3108 331 ProSiteProfiles DOG1 domain profile. 111 328 IPR025422 GO:0006351|GO:0043565
Amo18g3108 331 PANTHER TRANSCRIPTION FACTOR TGA9 1 331 - -
Amo18g3108 331 Pfam Seed dormancy control 128 204 IPR025422 GO:0006351|GO:0043565
Amo18g3108 331 MobiDBLite consensus disorder prediction 1 65 - -
Amo18g3108 331 Gene3D - 45 97 - -
Amo18g3108 331 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 1 331 - -
Amo18g3108 331 Pfam bZIP transcription factor 46 86 IPR004827 GO:0003700|GO:0006355
Amo18g3108 331 SMART brlzneu 42 105 IPR004827 GO:0003700|GO:0006355
Amo18g3108 331 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 49 64 IPR004827 GO:0003700|GO:0006355
Amo18g3108 331 Coils Coil 65 92 - -
Amo18g3108 331 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3108 Amo-Chr18 130057360 130065857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3108 1 331 bZIP Transcription Factor Family AT3G12250 80.967 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo18g3108 DOG1 7.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3108 K14431 - mnt:21406727 565.844