Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g3003 ATGGCAGAAGTCATCAACATGCCCTCCGATTCCGTCGACAAATCCCCTTCCTCCTCTGCTCCACCTCCGCCTCCTCCACCTCCTCCTGCTCCTCCCTCTTCCTCCACTTCCGCCTCTGCCTCCGTTTCCGCGCCCGCCAATGACGATCTACCACCTCCACCTCCCCCGCCGCCGCATTCCTCCACCCGGAGGAGGGACAGGGACAGGAGGGATGATAGGGATTTTGATCGCCACTCTCACCGTCGTGGTGGCGCTGGCGGTGCCGGCGACTACTACGACCGGAACATGTCTCCCCCGCCGCCCCCTCCCAGGGACAGGGATAGAGACAGGGACTTCAAGCGCCGTCGCAGCCCCAGCCCTCCCCACCGCGACCGCCGCTATTCTCCCGCCTCGCGTCGCTCCCCTCCGCCGTATAAGCGATCCAGGAGGGGTAGTCCTCGTGGTGGTTATGGTCCCGATGACAGGTTTGGGTATGATTATTATGGCGGCTACGAAAGGGGCGTGGGTGGAAGATCTGGTTATGCTGATGATAGGTCTTATGGCAGGTTTGGACACCGTCCTGCTGGGGGATATCAAAATGGGATTTCTGATATGGAAACCAATCGTAGTTATGCAGACATGCCAAGTGGTGGTGCACAAAGAGAAGGGTTGATGTCCTATAAGCAATTCATCCAGGAGCTTGAGGATGATATACTGCCAGCCGAGGCAGAGCGTAGATATCAAGAGTACAGATCAGAATACATTTCTACCCAAAAGCGAGCTTATTTCAATGCACATAAGGATGAGGACTGGTTGAAAGATAAATATCATCCAACAAATTTACTCGCAGTCATCGAAAGGAGGAATGAAAATGCTCGACAGCTGGCAAAGAATTTTTTACTGGATCTGCAGAGTGGGACATTGGAACTAAATCCTGGTTTAAATGCCTCCTCATCCAGCAAATCAGGACCAGCAAGTGAACCAAATTCAGAGGAGGAAACAGAGACTGGAGGTAAAAGAAGAAGACATGGTAGGGGATCTGATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTGTCAGTTCTGATCTTAGACGGATACAAACTGATATTCAACAAGCACAAGCACTTGTTCGTAAGCTTGACACAGAAAAAGGAATTGAAGACAATATTTTATGCAGCAGTAATCACAATAAAAATGATGACAAAGTTCACAGTGGCTCTGTAGGACCCATAATAATTATTCGGGGCCTGACATCTGTTAAAGGTTTAGAGGGTGTTGAGCTTTTGGACACACTTATTACATATCTATGGCGGATTCATGGTGTAGACTATTATGGTATGACTGAGACTAATGAGGCCAAGGGTTTTAGGCATGTGAGGGCAGAAGGAAATGGGCATGAAGAAACAGGCAGGTCAGGATCTGAATGGGAGAAGAAACTTGATTCATTTTGGCAGGGAAGGCTGAATGGTCAGGATCCCTTGGAAGTTATGACTGCTAAGGAGAAGATAGATGCTGCTGCAGTTGAGGTGTTGGATCCCTATGTGCGGAAAATTAGGGATGAAAAGTATGGATGGAAATATGGTTGTGGAGCTAAGAGCTGCACAAAGCTTTTTCATGCAGCAGAATTTGTGCACAAACATCTGAAGCTAAAACACCCAGAACTTGTTATGGAACAAACTTCAAAAGTGCGTGAGGATCTCTATTTTCAAAATTACATGAATGATCCAGATGCTCCTGGTGGAACGCCTATCATGCAGCAACCACAGAAGGACAGACCTTTAAAGCGAAGATTGGGATTGGAAGGCCGGTTGAGAGACGATCGTGGTAATCGTCGAGATCATGATCGGAGTGACAGGATAAATGATGGAGATAGGCCTGAGAGTTCCCCCAGCCGTGAGAGGCAATCTAAAGCACTCGAGATGGGGAATCATGATGAAACCATGTATGATACATTTGCTGGTCCTGGCGTACCTCCATTTGCTTCTGATATGCCGCCTCCTCCACCAGTGTTGATGCCTGTTCCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTAAGAGAACAAGGAGGACCATCATACGATGCCCCGGGTAGGAAGATGCGCGCCGGCCATCCTATGGGTGGACCAGCACCAATAATTGCTGTTCCTCCAGCTTTCAGACAAGATCCTCGGCGGATGCGCAGCTATCAAGATCTTGATGCGCCGGAGGACGAGGTCACTGTGATAGACTATCGGAGTTTATGA 2262 0.4934 MAEVINMPSDSVDKSPSSSAPPPPPPPPPAPPSSSTSASASVSAPANDDLPPPPPPPPHSSTRRRDRDRRDDRDFDRHSHRRGGAGGAGDYYDRNMSPPPPPPRDRDRDRDFKRRRSPSPPHRDRRYSPASRRSPPPYKRSRRGSPRGGYGPDDRFGYDYYGGYERGVGGRSGYADDRSYGRFGHRPAGGYQNGISDMETNRSYADMPSGGAQREGLMSYKQFIQELEDDILPAEAERRYQEYRSEYISTQKRAYFNAHKDEDWLKDKYHPTNLLAVIERRNENARQLAKNFLLDLQSGTLELNPGLNASSSSKSGPASEPNSEEETETGGKRRRHGRGSDKENDFSAAPKAHPVSSDLRRIQTDIQQAQALVRKLDTEKGIEDNILCSSNHNKNDDKVHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMTETNEAKGFRHVRAEGNGHEETGRSGSEWEKKLDSFWQGRLNGQDPLEVMTAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAAEFVHKHLKLKHPELVMEQTSKVREDLYFQNYMNDPDAPGGTPIMQQPQKDRPLKRRLGLEGRLRDDRGNRRDHDRSDRINDGDRPESSPSRERQSKALEMGNHDETMYDTFAGPGVPPFASDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSYDAPGRKMRAGHPMGGPAPIIAVPPAFRQDPRRMRSYQDLDAPEDEVTVIDYRSL* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g3003 753 MobiDBLite consensus disorder prediction 304 324 - -
Amo18g3003 753 Coils Coil 359 379 - -
Amo18g3003 753 Pfam Arsenite-resistance protein 2 465 652 IPR007042 -
Amo18g3003 753 MobiDBLite consensus disorder prediction 567 632 - -
Amo18g3003 753 MobiDBLite consensus disorder prediction 304 358 - -
Amo18g3003 753 ProSitePatterns Zinc finger C2H2 type domain signature. 525 548 IPR013087 -
Amo18g3003 753 MobiDBLite consensus disorder prediction 60 84 - -
Amo18g3003 753 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 753 IPR039727 GO:0006397
Amo18g3003 753 Pfam SERRATE/Ars2, N-terminal domain 221 302 IPR021933 -
Amo18g3003 753 MobiDBLite consensus disorder prediction 325 348 - -
Amo18g3003 753 MobiDBLite consensus disorder prediction 17 34 - -
Amo18g3003 753 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 753 - -
Amo18g3003 753 MobiDBLite consensus disorder prediction 702 721 - -
Amo18g3003 753 MobiDBLite consensus disorder prediction 586 632 - -
Amo18g3003 753 MobiDBLite consensus disorder prediction 1 160 - -
Amo18g3003 753 MobiDBLite consensus disorder prediction 100 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g3003 Amo-Chr18 126682829 126690652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g3003 99 753 C2H2 Transcription Factor Family AT2G27100 64.223 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g3003 - - lang:109355022 954.896