Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2950 ATGGCTGAAGCTTTAGTAGCAGGATCATTTCTATCTGCTTCCGTGCAGACTTTATTGGAGACAATAACCTCAGTGCAGTTCCAAGACTTCTTCAGGAAGACATGGAATCTGAATGAATCAATCTTGGATGAGTTGGAAACTACGTTGTTGACTCTTCAGGCTGTCCTCAATGATGCAGAACAGAAGCAGATTACCAACCCTTCAGTCAAAGAATGGCTTCAGAGGCTAAAAGATGCAGTGCATGAAGCAGAGGACTTGTTAGATGAAGTCAACACTGTGGCATTAAGGCACAATTTGGAGGATCAGCATCCACATCAATCTGTTGCCGGCAAGAAAAATGGTCTTGGCTTGCAACTTGTTAGCATGAGGGTGTTGGTTAGAGCACCAACAAGTTCTGTGGCAAATGAGTTGGGTGTAGTTGGTAGAGATGGTGATAAGGAAAAATTGATGAGTTTTCTGTTAACAAATGATGCAAACGGCAACAATAACAGAACAGGGGTGATTACAATTTTTGGCATGGCTGGTGTTGGCAAAACCACCCTTGCACAGCTTTTGTACAATGATCCTAGAGTTGAAGAGAATTTTGATCTGAAAGCATGGACATCTGTTTCTCAAGTATTTGATGCTACTGTGGTAACAAAAGCCCTTCTGGAGTCCCTGGCTTGTAGGCATTTTGAAGGCGATAATCTAGATTTCCTCCAAATTGAATTGAGGCAAATGGTTAAGGGGAAAAAGTTCTTGTTTGTGTTGGATGATCTTTGGAACAATAAATATGTGGAGTGGGATCACTTGCGAGCGCCTTTTAGTGAGGGAAAACAAGGGAGTAGGATCATCATCACAACTCGCCAAAGAGATGTTGCTAAAATGACACACACATTCCCAATTTACCATTTAGAACCATTGTCCCATGAAGATTGTTGGTCACTGCTGTCCAAGCATTCATTCGAAAACACTGATCCTAGAAGACAACCCAGGTTGGAAGTGATTGGCAGAAAGATTGCAGACAAGTGTGGTGGCTTACCTATAGCTGCAAAGACATTAGGAGGCATTTTGAGGTCCAAAGTGGATGAAAATGAATGGACCAATATTTTAAATAGTAACATTTGGGAGCTACTAAACGATGATATTCTACCTGCTCTTTGGTTAAGCTATATCTATCTCCCTGCTTGTTTAAAAAGATGTTTTGCTTATTGTTCAATTTTCCCGAAAGGGTATCCTCTGAATAAGAAACACGTAGTACTACTTTGGATGGCAGAGGGTTTGCTCCAACAAGGCCAGGAGAAATCAATGGAAGAAATGGGTAATCAATATTTTGATGAGCTATTGTCAAGATCAATAATTCAACAAGAGGGAGAGTGTTATGTAATGCATGACTTAATCAATGACTTGGCCACAGTTGTGTCAGGAAAGAGTTGTAACAGGTTTGAGGGCTCTGAAATAACAGAAAGCGTCCGGCACTTTTCCTATTCCAGAGGTAAGTATGACTCTTCGACCAAGTTTGAAAGTTGTTATAGAGCAAAATGCTTGAGGACGTTCCTCCCAATGCCGTTGACTGATGATCCAACTTTATGGTGGTATTGGAAGCATTACCTGACCAAAAGGATCACACATGATTTCCTGCTCAGACAAAGACGCCTGCGAGTGCTATCATTGGCGAACTATGATAACATCAATGAATTGCCTAATTCAATAGACATAGGAAACTTGGTTAAGTTGCGTCATCTCGATATCACTGGCACGAAGTTGAAGATGTCAAGACAGATAACAACCTTACAACACCTCCAAACCCTGAGTACTTTTGTTGTTGACAAACAATGTGAGGGACTAAAGCTTAAAGATATGCGATGCTTCCCGAAACTGCAGGGAAAACTATCAATCATGGAACTGTGCAATGTGGATCAAACAATAGATGCACTTGAAGCAAACTTGAAGAACAAACAGTTCATCGAGGAGTTGGTGTTAGATTGGAGCAAGCAAGCTGATCAAGGTTTAGGAACTGAAACTGAGGTCCTTGAGCATCTGCAGCCATCAAGAAACATAAAGAAGTTCATCATAGAGTCCTACAATGGAACCAAATTCCCAAGTTGGTTTGCAGATTCTTCATTTTCGAATATTGTGTTCTTGTCTATTAGTGGCTGCAACTATTGCTTATTTCTCCCACCACTTGGACAACTGCCTTCTCTCAAGGAACTTTATGTTACAAGGATGAAAACGATAAAGATTATTGGTCCTGAGTTTTATGGTACTTCTAGTTCTTCCTCTCCTTTTCAACCATTTCCATCCCTTGAGATCTTATCATTTGAGGAAATGCTAGACTGGGAGGAATGGCATGTGTTCAGTATAGAAGGCTTAGAGTTCCCTTTTCCATCTCTTAAGCATCTACGTTTGTACAATTGTCCTAAGCTGAAGGGTCATTTACCGCGCCATCTTCCTTCTAGTTTGACTGATGTTAACATATCATACTGTGATCAATTGGAAGCATCTACTCTACATTGGATTGCATCAACTAAAAGTTTGACTATCATTGATGGGGGTCAACATCTTTTGCCAATCCTTGAGACAGATTCGCAGTGCTCGCTGTCCTACATGAAGATCGAAAGGAGTGATAGGCTGACATCTTTTCCCAGAATGGTTCTTAGCAGCCATTGTCTCAGTGACTTGTATCTTACCAAAGTTCCATCTTTTACCTCTTTCCCAACCGAAAGCATGCCGTCTTTGCGAACATTAATGCTATCAGAATGCAAGAATTTGGAATTCCTACCTGATGAAGCTTGTAGGAATTACAGTTCACTTGAGAATTTGATGATTTGGGATAGTTGTCACTCTCTCAGTTGCTTTCCATTTGGATCTCTCCCTGTACTCAAATATCTTCATATTTGGGGCTGCCCCAATCTCATATCAATTTCTTTTTCAAGTGTTGACAGTTATGCACAAAATTTGTCAAATCTTCAAATATTGAGAATAAGCAACTGTCCTAATCTGGAATCATTTCCTCAAGGTGGATTGTCCACTCCCAACCTAATGGAATTCAAGGTCATTAATTGTGGGAAGCTAAACTCACTACCGGAACGGATGAACATTCTCTACGCTCTTCAAGATTTAGATATCTCTAATGTTCCACAACTTGTGTCATTTCCTCAAGGTGGCTTGCCGCCGAAGCTACGATCCGTGTTCATAGGCTTTTGCAAAAGTCTATCACCCGTGGCTATATCTGAGTATGGTTTCCAGTGGCTCAGTTCTCTTTTGAAGCTTGGAATTGGAGGTGATGATCTTGTTCAATCATTCCTGGAAGAAAATTCAAATGCATTTCAACATCTCACCATTCTTCAAGAGCTTCACATCCTAAGGTGTTCAAAGATTGAGTCCTTGCCTGAAGACAGGTTACCTTCCTCTCTTTTATTATTGAGGATTCAGGATTGTCCCCTTCTAGAAGCAAGGTACAATAATAGGAGAAAGACACATTTCTCTAAGATTTCTCACATACCTACCATAAGAATAAATGAAGATGTCATAATATAA 3519 0.4049 MAEALVAGSFLSASVQTLLETITSVQFQDFFRKTWNLNESILDELETTLLTLQAVLNDAEQKQITNPSVKEWLQRLKDAVHEAEDLLDEVNTVALRHNLEDQHPHQSVAGKKNGLGLQLVSMRVLVRAPTSSVANELGVVGRDGDKEKLMSFLLTNDANGNNNRTGVITIFGMAGVGKTTLAQLLYNDPRVEENFDLKAWTSVSQVFDATVVTKALLESLACRHFEGDNLDFLQIELRQMVKGKKFLFVLDDLWNNKYVEWDHLRAPFSEGKQGSRIIITTRQRDVAKMTHTFPIYHLEPLSHEDCWSLLSKHSFENTDPRRQPRLEVIGRKIADKCGGLPIAAKTLGGILRSKVDENEWTNILNSNIWELLNDDILPALWLSYIYLPACLKRCFAYCSIFPKGYPLNKKHVVLLWMAEGLLQQGQEKSMEEMGNQYFDELLSRSIIQQEGECYVMHDLINDLATVVSGKSCNRFEGSEITESVRHFSYSRGKYDSSTKFESCYRAKCLRTFLPMPLTDDPTLWWYWKHYLTKRITHDFLLRQRRLRVLSLANYDNINELPNSIDIGNLVKLRHLDITGTKLKMSRQITTLQHLQTLSTFVVDKQCEGLKLKDMRCFPKLQGKLSIMELCNVDQTIDALEANLKNKQFIEELVLDWSKQADQGLGTETEVLEHLQPSRNIKKFIIESYNGTKFPSWFADSSFSNIVFLSISGCNYCLFLPPLGQLPSLKELYVTRMKTIKIIGPEFYGTSSSSSPFQPFPSLEILSFEEMLDWEEWHVFSIEGLEFPFPSLKHLRLYNCPKLKGHLPRHLPSSLTDVNISYCDQLEASTLHWIASTKSLTIIDGGQHLLPILETDSQCSLSYMKIERSDRLTSFPRMVLSSHCLSDLYLTKVPSFTSFPTESMPSLRTLMLSECKNLEFLPDEACRNYSSLENLMIWDSCHSLSCFPFGSLPVLKYLHIWGCPNLISISFSSVDSYAQNLSNLQILRISNCPNLESFPQGGLSTPNLMEFKVINCGKLNSLPERMNILYALQDLDISNVPQLVSFPQGGLPPKLRSVFIGFCKSLSPVAISEYGFQWLSSLLKLGIGGDDLVQSFLEENSNAFQHLTILQELHILRCSKIESLPEDRLPSSLLLLRIQDCPLLEARYNNRRKTHFSKISHIPTIRINEDVII* 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2950 1172 Gene3D - 125 293 IPR027417 -
Amo18g2950 1172 SUPERFAMILY L domain-like 785 1145 - -
Amo18g2950 1172 Gene3D - 14 116 - -
Amo18g2950 1172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 398 IPR027417 -
Amo18g2950 1172 Pfam Rx N-terminal domain 12 102 IPR041118 -
Amo18g2950 1172 Pfam NB-ARC domain 146 365 IPR002182 GO:0043531
Amo18g2950 1172 Gene3D - 383 466 IPR036388 -
Amo18g2950 1172 PANTHER - 50 879 - -
Amo18g2950 1172 Coils Coil 69 93 - -
Amo18g2950 1172 PRINTS Disease resistance protein signature 240 254 - -
Amo18g2950 1172 PRINTS Disease resistance protein signature 167 182 - -
Amo18g2950 1172 PRINTS Disease resistance protein signature 901 917 - -
Amo18g2950 1172 PRINTS Disease resistance protein signature 337 351 - -
Amo18g2950 1172 CDD RX-CC_like 13 89 IPR038005 -
Amo18g2950 1172 Gene3D - 300 382 IPR042197 -
Amo18g2950 1172 PANTHER DISEASE RESISTANCE PROTEIN RP 50 879 IPR044974 GO:0006952
Amo18g2950 1172 Coils Coil 42 62 - -
Amo18g2950 1172 Gene3D Ribonuclease Inhibitor 859 1051 IPR032675 -
Amo18g2950 1172 Gene3D Ribonuclease Inhibitor 529 847 IPR032675 -
Amo18g2950 1172 SUPERFAMILY L domain-like 455 841 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2950 Amo-Chr18 125343915 125347673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2950 134 301 WRKY Transcription Factor Family AT4G12020 24.324 1.32e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2950 - - adu:107462840 2163.27