Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2918 ATGAAAACGGAGATTGAGGGAGAAAGAAGGAGGAGGCTAAGAATGGCAACTATTGTATCCATTATTCTAAAACAATTCCCATGTGATAAGTTTAACTCAACCCTCTACCTTTCAATAGTAGTTGCCATCATTATTAGCATCCTTCTTGTGATTAATCTAACTATCACAAGAAGAAGCAAATCAATTATAAATCTTCCACCATCACCACCAAAGTTACCATTCATTGGAAACCTTCACCAACTAGGAACACTGCCACACCGTTCTTTCCAAGAACTCTCCAACAAGCATGGCCCTCTCATGTTCCTTCAGTTAGGGCAAATCCCAGCATTAGTGGTTTCATCTGCAGATTTGGCCAAGGAAATCATCAAAAACCATGATCTTGTTTTCGCGAGCCGCCCTCGAACGACGGCCGGAAATATCTGTATCTATGGCTGCAAAGACATAGCGTTTGCGCCCTACAACGAAGCATGGAGACAGAAAAAAAAAGTTTGTGTTGTTAAACTTCTAAGTACCAAAAAAGTTAAATCGCTTCTCCCTGTAAGACAACATGAGGTTGCAAAACTTGTTGCTACCATCCAAGAAGCGTGCTCAAGAGAAGTCTCATCATCATCTTGTGTGATTAATCTTAGTGAGTTGTTGGTTGCTACATCGTACAACATCGTTTCAAGATGTGTTCTTGGACAAAACTTTGATTTCTCAGAAGTTAGTGGTCATGGAAGCTTTGGAGAGCTTGGCAGGAAGTTGGTGAGGCAATTCGGTGAGTTTTGTGTTGGTGATTTCTTCCCCTCATTGGGTTGGGTTGATGCTGTTAGAGGCTTGACTTCCAAGTTTAATGCCACTTCTGTAGCAGTAGATGCTTTCATGGAAGGAGTAATTGAAGAGCACAAGAAAAATAAGACGAACAATGATGATGATGATGATAGTAACAAAGACTTTGTGGCTATACTTCTTCATCTTCAAGAGATGGGTATGCTTGAATTTGAGTTCACTAGAGAAGATCTCAAAGCAATCCTAGTGGACATGTTTCTTGGAGCAACTGATTCTAGCTCCACCATTTTAGAGTGGACTTTTTCTGAGCTCCTTAAGAATAAGCCAAGTACCATGAAGAAAGTTCAAGAAGAGGTAAGACAAGTTGTGGGGAACAAATCAATGATAGATGAAAATGACATAAATCAAATGAACTATTTGAAGTGTGTGATCAAAGAAGTTCTTAGGCTACACCCACCTCTTCCTGTCTTAGTCCCTAGACAAACAACATCAAATTCAAAAATAAAAGGCTATGATATTCCGTCAAAAACAACTGTTTATTTGAATGTTTGGGCAATTCATAGGGACCCTGAATTATGGAAGGATCCTGAAGAATTCATTCCTGAAAGATTTGAAAGTAACCAAATTGATTTCAAAGGACAAGATTTTCAGTATATCCCTTTTGGATCCGGAAGAAGGGGTTGTCCTGGAATGTCATTTGGACTTGCTTCTACAGAATATATTCTTGCTAATCTTTTATATTGGTTTGATTGGAAGCTGCCTATAAATGAAGACATAGACATGACTGAAATGTCTGGAATCATTGTTAGCAAGAAAGTACCACTTCATCTTGAAGCCGTAATGATGGACAATTAG 1623 0.39 MKTEIEGERRRRLRMATIVSIILKQFPCDKFNSTLYLSIVVAIIISILLVINLTITRRSKSIINLPPSPPKLPFIGNLHQLGTLPHRSFQELSNKHGPLMFLQLGQIPALVVSSADLAKEIIKNHDLVFASRPRTTAGNICIYGCKDIAFAPYNEAWRQKKKVCVVKLLSTKKVKSLLPVRQHEVAKLVATIQEACSREVSSSSCVINLSELLVATSYNIVSRCVLGQNFDFSEVSGHGSFGELGRKLVRQFGEFCVGDFFPSLGWVDAVRGLTSKFNATSVAVDAFMEGVIEEHKKNKTNNDDDDDSNKDFVAILLHLQEMGMLEFEFTREDLKAILVDMFLGATDSSSTILEWTFSELLKNKPSTMKKVQEEVRQVVGNKSMIDENDINQMNYLKCVIKEVLRLHPPLPVLVPRQTTSNSKIKGYDIPSKTTVYLNVWAIHRDPELWKDPEEFIPERFESNQIDFKGQDFQYIPFGSGRRGCPGMSFGLASTEYILANLLYWFDWKLPINEDIDMTEMSGIIVSKKVPLHLEAVMMDN* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2918 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Amo18g2918 540 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 SUPERFAMILY Cytochrome P450 66 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 Pfam Cytochrome P450 66 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 Gene3D Cytochrome P450 51 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 33 534 - -
Amo18g2918 540 PANTHER CYTOCHROME P450 71B11-RELATED 33 534 - -
Amo18g2918 540 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 PRINTS E-class P450 group I signature 117 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 PRINTS E-class P450 group I signature 397 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2918 540 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2918 Amo-Chr18 124310760 124313162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2918 64 532 Cytochrome P450 AT3G48310 43.763 2.50e-146 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2918 K20617 - gmx:100792382 587.03