Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2909 ATGGCTTTTGGTTTTCAAGTTTCAACCTCTCAATGTGGAGCGAAATTAGGAACTCTCATATTTGAAGTCGGTAAAAACTTTATGGTATACATTGGTATGATCATCTTATGTAGCGGTTTACATTTTCTACTAAAGCTTTATTCACAACCTCGCATTACTTCTCAGATAATTGTAGGATTAATTTTGGGAAACATAGGTTTCATACGTAATTTACTTACAAAATTTCACAGGACCTTCGGATTCATAATTGATTTTGGTATGATGTGTTACATGTTTGTATTAGGGATAGAAATGGATCCTTTTATACTATTTAAGCGACCTTCTAGACATGCTCAAGTTGCTTATGGTGGCATACTCTCGACATTTATTATAGGATTATTGACAACTCCAATTACTGGATATTTTCCACACCAGCCTAGATTATTAGAATTCACCATCTATCTATGCACACTTCTTTCAAGCTCTGCCTCTCCTGTGTTAACCCGTTTGATAACTCATCTCAAAATAGGAAAGTCAGATATTGGACAGCTTGTCATCGGAGCAGGGATGCATTCGGATTTTGTGTGTTCTTTAATCCTTTGTCTTGGCTACATTATTTCACCAATCCCTTTGTACTGTGAAGCTTTGAGAAATGAGCATGCTTTAGAAAATCATAAGAAGATAATTAAGACTCAAATTATCATGGGTTTGGTAGTTTTGGGTCAGATGATGATTGTATCCCTACTATCGCCATTATTTATGAATTGGGTTAATAATGAAAACCCAGAAGGTAAACCCATGAAAGGGTCACACCTGGTGCTATCCCTTGCTTTCATGGTTCTAATGTGTGCTACCTCCCCCCTGTATGGTTATCATCCAATTTTAAGTGCTTTTGTGACAGGAATTTGCTTACCAAGAGAGGGTAGACTATCAAAATGGGTTATAACCCGAGTAAACTATTTATTGACCATCATATTCTATCCTATCTTTTTCTTGTGGATGGGATATGAAGCCGATTTTCGCAAGTCTGAGCCTTCAAATATAGGAACATGGATGAAATTCTTTGTACTACTATTTGTAGGCATGACTGGAAAAATTGTTGGAACCATAATTTCTGGAGCAATGCTTGGCTTTCACTGGCCTGATTCAGTTGCAATAGGATTGCTCCTTACTATGAAAGGCCATCCTCATATCTATCTAGCTATCAAAGGAAAAACTTGTGATATAACTATTTCTACATGCATTGGGATGATAATTGCAAGTTTTGTGACAATTGTGCAAGCCCCATATGTTATAGCAAATATAATCAAGAGAGCAAGAAAACGGACACATACTCATCAGATGGCTCTTCAACTGCTTGATCAATCAAGCGAGCTAAGGATTCTCCTGTTCGTTCATGGGCCACACAACATTCCTGCATCAATCAATTTCATGGAGATCTCACGTGGCACCACAGACCCTGGCATTCTAATCTACGTTGCTGACATGATTGAACTTACTGATGAACTTTCAGCCACATTAGAAAGGGATGAAGGGGTTCACATGGCAACTATTAAAGATAAGAAAGTCATGGACATGAGGGACCAAGTGACCAATTCTTTCCAAAGCTATGTAGCCATCAACGGCGATGGAGTTACACTTAAAAGAACTATGGCACTCTCAACTATCAATAACATGCCGCAAGACATATGTGTTTTAGCAGAAGACTTGATGATTTCTCTTCTCATACTTCCATTCCATAGGATCCAGCGTCAAGATGGAACATTGGATGCTGGTAATCAAAGTTTCAGATATGTCAATAGAAAGGTACTAAGAAGTGCCCCTTGTTCTGTTGGAATTCTTGTTGATAGAGGCCTTGGAAATATTGAACGAATATCAAGATCTGAAATAACAATAAATGTGGCAGTTATATTCATTGGAGGAAAAGATGACAGGGAAGCACTCGCTTATGCTAGTCGTGTGTCACAACATCTAGGAGTCAAACTTACAGTAATAAGATTACTAGTAGATGCTAATGCTGAGGCTTCTGGATTAGTAGGATACATGGTGGTTAATCCAGAGCAAGAGCAGGAGAGGCAACTAGATGATGAGTATTTTGCACAATTTTATGAAAATCATGTAGTTGGAGGTCGCATTTTGTATACGGAGAAGCATCTAGCAAATGCTGCCGAAACCTTTTCTACTCTAAGATCGTTAGAAGGATTGTATTCATTGGTCATTGTGGGAAGAGAAGGTGGAGTAAACTCTATATTGACAAGAGGGATGAACGACTGGCAACAGTGTCCAGAATTGGGACCAATAGGGGATGTTTTGTCGGGACCTGATTTCTCTACAACTATGTCTGTGTTGATCATTCAACAACATAGACTTAAAGGAGAATTAGATGGATTGGATGAGGACTTCTCTATCATGTAG 2394 0.3839 MAFGFQVSTSQCGAKLGTLIFEVGKNFMVYIGMIILCSGLHFLLKLYSQPRITSQIIVGLILGNIGFIRNLLTKFHRTFGFIIDFGMMCYMFVLGIEMDPFILFKRPSRHAQVAYGGILSTFIIGLLTTPITGYFPHQPRLLEFTIYLCTLLSSSASPVLTRLITHLKIGKSDIGQLVIGAGMHSDFVCSLILCLGYIISPIPLYCEALRNEHALENHKKIIKTQIIMGLVVLGQMMIVSLLSPLFMNWVNNENPEGKPMKGSHLVLSLAFMVLMCATSPLYGYHPILSAFVTGICLPREGRLSKWVITRVNYLLTIIFYPIFFLWMGYEADFRKSEPSNIGTWMKFFVLLFVGMTGKIVGTIISGAMLGFHWPDSVAIGLLLTMKGHPHIYLAIKGKTCDITISTCIGMIIASFVTIVQAPYVIANIIKRARKRTHTHQMALQLLDQSSELRILLFVHGPHNIPASINFMEISRGTTDPGILIYVADMIELTDELSATLERDEGVHMATIKDKKVMDMRDQVTNSFQSYVAINGDGVTLKRTMALSTINNMPQDICVLAEDLMISLLILPFHRIQRQDGTLDAGNQSFRYVNRKVLRSAPCSVGILVDRGLGNIERISRSEITINVAVIFIGGKDDREALAYASRVSQHLGVKLTVIRLLVDANAEASGLVGYMVVNPEQEQERQLDDEYFAQFYENHVVGGRILYTEKHLANAAETFSTLRSLEGLYSLVIVGREGGVNSILTRGMNDWQQCPELGPIGDVLSGPDFSTTMSVLIIQQHRLKGELDGLDEDFSIM* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2909 797 PANTHER CATION/H+ EXCHANGER 3 11 795 - -
Amo18g2909 797 Gene3D - 25 439 IPR038770 -
Amo18g2909 797 PANTHER CATION/H + ANTIPORTER 11 795 - -
Amo18g2909 797 Pfam Sodium/hydrogen exchanger family 29 416 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2909 Amo-Chr18 124106721 124112376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2909 22 797 Antiporter Super Family AT3G52080 47.029 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2909 - - cam:101501359 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2909 18 124106721 124112376 Amo08g1676 08 27807536 27810517 hybridization
Amo13g1550 13 21032341 21035688 Amo18g2909 18 124106721 124112376 PCT