Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2906 GCATTCGCGTTCGTCTGGAAGCCACGTTGCTCTGCTTCAAACTCTGCGACCAACCCGGGCGCTCCACCTAGCCGTAGAACTGCTCTCTTTTGTCACCGTCAGTGCAGTGCAGGGTTGGGTGGAGTGAGAATCTGGCCTTACCCGCCCCCCATTGATTTCCATGAATATGATGTATTGGAGTTGATAAAACCCATGCCTGCTTTTGTGAGGATACTGAATGATGCTTTGAGGAGTATGGTGAATGCAGAGAGGAGAGGGAAAGCTTCTGTGGAGCTCAAGCCGATCTCCACTGTCATCTCCTCCTTTCTCCAAATCATGAAAACTCGAGGCTATATCAAGAACTTCGAAGTTTATGATCCGCATAGAGTGGGCAGGATAACAGTTGAATTGCAAGGTAGGATTAATGATTGCAAGGCACTTACATATCGACAAGACATCAAGGCGAAGGATATTGAAGCCTACAGAATTCGCACTCTCCCAACGCATCAGTGGGGTTATGTTGTGATTACGACTCCTGATGGTGTTTTGGATCATGAAGAGGCCATTAGAAGGAATGTGGGTGGACAGGTTCTTGGTTATTTTCACTAG 588 0.4745 AFAFVWKPRCSASNSATNPGAPPSRRTALFCHRQCSAGLGGVRIWPYPPPIDFHEYDVLELIKPMPAFVRILNDALRSMVNAERRGKASVELKPISTVISSFLQIMKTRGYIKNFEVYDPHRVGRITVELQGRINDCKALTYRQDIKAKDIEAYRIRTLPTHQWGYVVITTPDGVLDHEEAIRRNVGGQVLGYFH* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2906 195 ProSitePatterns Ribosomal protein S8 signature. 165 182 IPR000630 GO:0003735|GO:0005840|GO:0006412
Amo18g2906 195 Gene3D - 135 195 - -
Amo18g2906 195 PANTHER 40S RIBOSOMAL PROTEIN S15A-5 70 195 - -
Amo18g2906 195 Gene3D - 67 134 - -
Amo18g2906 195 Pfam Ribosomal protein S8 72 193 IPR000630 GO:0003735|GO:0005840|GO:0006412
Amo18g2906 195 PANTHER 40S RIBOSOMAL PROTEIN S15A 70 195 IPR000630 GO:0003735|GO:0005840|GO:0006412
Amo18g2906 195 SUPERFAMILY Ribosomal protein S8 69 194 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2906 Amo-Chr18 123975086 123977746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2906 70 195 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 84.127 5.89e-79 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2906 K02957 - jre:108989768 235.343