Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2903 ATGAATACTGAGGTATTACATGAGTTAGGGTTTCCTGGGTGTGGAAAGACTGATCATTATAGGAAGCATTGGCATACACATTGTCAGCGATCTGCTACGAGAAGTGGAAAAGTGGGAATCCAATGGAAAACCGCCGTTGAGTTTGCTGGAAGATATTGGAGAACTATTTGTTGTTGGTACTCGTGGTCAAAGAAGATAGATGTTGGAGGCAGGGTAACAGCGACTGGCGAAAACAGAGCAACTTATGACCTATCGAGTGATGGATGGAGCACAGGATCGGAGGCTGACGAATGTGAGACAGCAAGGCTTGAGTCAGGGCAATTAGAAGAAGTGGACATGACAAGGTTGGATACTGAGGAAAGTAGTAGGGTAGCAGATGATGCAAAAGATCAAGGATCTAGTTCAGCAACTGTGAGGTCAGTTGAAGAACCAAATAGTTCCAATCGCTGCGAGGCAGGGGTAACAACAGAAGATTTGGCTATTGCTGAGTTCGATTCAGTTGAGGAGGCATATGTAAGGTATGTGGAATATGCACGGGTTACCGGGTTTGCGGTTCGAAAGGGAGATTCGGGAAGAGATAATGAAGGTAATGTTGTGAGAAAATTTTTCTTCTGCAACAGAGAAGGATTGCGCGATAAGAAACATTACGAGAGGATTGATAGACAGCGGGCACACAAACCAATTACAAGAACCAATTCTAATGCTAGGTTTCTGGTTCATCTAGACAAGGGTTGTGGAAAGTTGAATATGAAGTCTTTCGTTGTGGATCATAACCATGAACTAGCCCCAGCAGACCACACAAATGTAATGGCACCACATCGGCACATATGTGAGGGAATCAATTCATCCCTCAAGAAGTTTATTAGATCTGGAAATTGTCTACTTGAGCTCGTGGAGAACCTGGATCGTGTGGTGAAGGATTATCAGAATAATGAGTTCATGGCCGACTTCAAATGCTTGTATTCGGAACCGGTGATGACAACAGGGTTGGAAAGTATTGAGAAGGCTGTAAGCAAGGTGTATACGCGAGAAATATTCTTTGAGGTTAAGAAACAAATAGAGTCAGTTGCTGCATTGCTCGTGCTTCATCATGAGACTTATGGTACCATTCAAAAGTTCATGCTAAGGAAGTTCCGAAGGCCCCTTCGAGTTTATACTATTTTATACAATAGCAGTTCCAAAAATTATGAGTGCTCGTGCAAGTTGTGGAACAGTCTAGGGGTCCCTTGTAGTCATATATTTTGTGCGATGAAGGAACTTGAGATAGAGGCATTGCCAAGGCGATTAGTGCTTCGCAGGTCGTGTAAAGATGCAAAAACATTGGAGAAAGTTGGTGCGGTTCCAATGGCCGATCCGGAAAAGGCGTTTCGGGAACGTTATGGGTCCATGTGGAGTGCATCGGGCCCACGAGGCGGAAGGAACCGATTTAGGAGAGCAGGCGATGACCATGTCAACATGCTGGATCCAACTATTGTAAAGTCGAAGGGTGCTCCCAGGGGCAGCACGAACGCAAAAATAGGAAGGCGATGTAGAAGGTGTAATGGGCTTGGGCACGACCGTAGGAATTGTACTGCGAGGAACGAACAACCAGATGATGAGGTAGTAGGAACTATGAACGGCCAGTATCAAACTTCTTGTAAAAGGGTTTGA 1650 0.4491 MNTEVLHELGFPGCGKTDHYRKHWHTHCQRSATRSGKVGIQWKTAVEFAGRYWRTICCWYSWSKKIDVGGRVTATGENRATYDLSSDGWSTGSEADECETARLESGQLEEVDMTRLDTEESSRVADDAKDQGSSSATVRSVEEPNSSNRCEAGVTTEDLAIAEFDSVEEAYVRYVEYARVTGFAVRKGDSGRDNEGNVVRKFFFCNREGLRDKKHYERIDRQRAHKPITRTNSNARFLVHLDKGCGKLNMKSFVVDHNHELAPADHTNVMAPHRHICEGINSSLKKFIRSGNCLLELVENLDRVVKDYQNNEFMADFKCLYSEPVMTTGLESIEKAVSKVYTREIFFEVKKQIESVAALLVLHHETYGTIQKFMLRKFRRPLRVYTILYNSSSKNYECSCKLWNSLGVPCSHIFCAMKELEIEALPRRLVLRRSCKDAKTLEKVGAVPMADPEKAFRERYGSMWSASGPRGGRNRFRRAGDDHVNMLDPTIVKSKGAPRGSTNAKIGRRCRRCNGLGHDRRNCTARNEQPDDEVVGTMNGQYQTSCKRV* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2903 549 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 275 442 IPR031052 GO:0006355
Amo18g2903 549 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 125 269 IPR031052 GO:0006355
Amo18g2903 549 ProSiteProfiles Zinc finger SWIM-type profile. 385 421 IPR007527 GO:0008270
Amo18g2903 549 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 275 442 - -
Amo18g2903 549 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 125 269 - -
Amo18g2903 549 MobiDBLite consensus disorder prediction 109 127 - -
Amo18g2903 549 SMART 26again6 396 423 IPR006564 GO:0008270
Amo18g2903 549 MobiDBLite consensus disorder prediction 109 152 - -
Amo18g2903 549 Pfam FAR1 DNA-binding domain 174 262 IPR004330 -
Amo18g2903 549 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2903 Amo-Chr18 123918115 123922022 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g2903 FAR1 7.9e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2903 - - ahf:112770305 551.977