LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo18g2836	ATGTTCACGGATGCAATAGGGAATGCAGGGTACTCTCTGCTGAACGATTTAAGAGCTGAAATTGAAGTGAAGGATGGAACTTTTTCTCTCTGCTTTTGGGTTTATTTGGCCAACTCAACTACATTTCCTGCTACCATTATTCAGCAGGTTTGCTCTGATGTTTCTGAAAGTGCTCCTTTCCTCGTTATAAATGATCACAAGAGAATTAATCTTCTACCGCTTCTTCTCTTACATGAAGAAGCTCCTGATACTGGCAATATCAATTCCTTGACAGAAGTTGCATATGCAACTGTAGATTTTGAGTTTCCATTGCAAAATTGGGTTCACGTTGGATGTGAGGTTTGCCCTAATCACATGAAACTACAGATTAATGGAGAGATTGTTGGAGAAAAACCGCTGTCATCAAATAAGGAACCCAGTTCAAATGATTTGAGGAAAATAGTTTTGGCAAATATTGGTGGAGATGGAAATATTTCACACGGTTATGTGTACAATTTTCAAGTTTTCCCTTCTGTTTCATCTATTAAAGATCACCATATGAAGGATCCTCCTCTAAAGTTATCTATTGATGAGTCATCTGCCTCTGAGATTGAAGAAGAAAGTGATGGTGTTTGGAGCATTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGACGTTGTACTATTAGATGTTTTTGGCCAACCTGTTGATAAGGAGAATGAGGTTTATGCTTCACTTTTGTATGCTGACACACGGGCACCAGTGGAGAATACAATTGATGAAGAAGCACCCATTTTGGCTAGCTATGATGGAATTGAATTTCCTTCTTATGAAAGACCGAGTAAACTTTTACTGGGCCGTGCATCTTTTAAGCTGAAGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAAATTCTGTGTTCCAAAATTAGGAAATTATCCTTTTTTTGAGGCACTCTCCCGTCCAATTCGATGCATCTCCAGGAGTCGTAATACCCGATTGTCTACCCTGGTGTGGAAAAGGTCACCTGGTCTTCCTAAGCATAATTTAATGCAATCTTCAGGAATGGATGATGCATCCTTTGAACATCAGCATCCTGTTTGTGAGGCAAAATCTAATCCATTAACGAAGCGATTCAGATTTGGACATGACAAGATATCCGTATCAGTGAAGGCTGACACCAACCTAGAGCAACCTGACGAGGAATGTAATTCTCATGCCCGGACTACTAATCAGGTTGAGAATGGGCTTACAACTGGCTTGTATGGCACACCTGCTAACTACGAGGCATATGAGACTCTGTCTGATTCAGAGAGTATAGGGGAGAGAAATTCACCTTCAAATAATGTGGCAAGTAGAAGATATCCAATATCTGACATGACTGTTTTTAAGTACTGCTTGGCTGGCTTGGCTGAGAGATCGCTGATGCTTAAGGAGATTGCATCCTTGGCCTCAAAGAAAGAAATTTCAGAGTTGGCCCATCATGTGTCACTTTATTCAGGATGTTCACACCATGGGTAA	1524	0.4068	MFTDAIGNAGYSLLNDLRAEIEVKDGTFSLCFWVYLANSTTFPATIIQQVCSDVSESAPFLVINDHKRINLLPLLLLHEEAPDTGNINSLTEVAYATVDFEFPLQNWVHVGCEVCPNHMKLQINGEIVGEKPLSSNKEPSSNDLRKIVLANIGGDGNISHGYVYNFQVFPSVSSIKDHHMKDPPLKLSIDESSASEIEEESDGVWSIVGGKASCRRNFSLDVVLLDVFGQPVDKENEVYASLLYADTRAPVENTIDEEAPILASYDGIEFPSYERPSKLLLGRASFKLKISQLSSKCDNRLFLIKFCVPKLGNYPFFEALSRPIRCISRSRNTRLSTLVWKRSPGLPKHNLMQSSGMDDASFEHQHPVCEAKSNPLTKRFRFGHDKISVSVKADTNLEQPDEECNSHARTTNQVENGLTTGLYGTPANYEAYETLSDSESIGERNSPSNNVASRRYPISDMTVFKYCLAGLAERSLMLKEIASLASKKEISELAHHVSLYSGCSHHG*	508

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo18g2836	507	PANTHER	SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION	8	507	IPR001217	GO:0003700\|GO:0006355\|GO:0007165
	Amo18g2836	507	PANTHER	SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR	8	507	-	-
	Amo18g2836	507	SUPERFAMILY	Concanavalin A-like lectins/glucanases	25	172	IPR013320	-
	Amo18g2836	507	Gene3D	-	7	178	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo18g2836	Amo-Chr18	120513924	120520846	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	STAT	Amo18g2836		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo18g2836	-		-	gmx:100803169	762.296