Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2823 ATGGCAAAAATAAGAGAAGGAACACTACTGCATGGTGTTCTTCACGTTACAATCTTTGAAGCTGATAACCTCTATGTGAATGACTGCTGCAATTGTTTCCCCAAGCTATCAGAAGAAACCTTCTCAAGTGGAAAAATTGGTGGTTGTAGAATATACACAACCATTAATTTAGGCAGTACTATAGTGGGCAGGACTAGATATGTAAACCAAAATGAACACTTTAATTTTCAGTGGCATCAATCTTTAAGAATTTACACTGCTCATATTGCAAGTGAAGTTGTTTTCCATATCAAAGAAGACGACACAATAATTGGTGCAAAAGTGATTGGAAGAGCATATTTTCCTGTGGAAGAGTTGGTAAATGGAGAAAATAAGGATATATGGCTCGAAATCTTGAATAAAAAACATAAACCTCTTAAAGCAAGGCCTAGAATCCATGTGAAATTACAGTTTTTTAATGTCACGAAGGACATTAACTGGTCTCAAGGGATCAAAAGTCTCGATTTTGCAGGGCTCACTCATTCATACTTTCCTCAGAGAAGTGGTTGTAGGGTCACACTTTACCAAGATACTCACATACCAACCACATTTTTTCCTGAAATCTTGCTAACTAAGGGTAGGTACTATGAACTGCATCAATGTTGGGAAGACATCTTTAATGCCATTTCGAAGGCGAAACAGTTGATTTACATAGCAGGATGGTCTCTTTGCACCAAAATCACCTTGGTTAGGGAATCAACTTGCAAGAAACAAGAAAGTAGTGATTTGAATTTGACACTTGGTGAGCTTCTTAAAAAGAAGGCCAGTGAAGGTGTTAAGGTCCTTATGCTCATTTGGGATGACAGAACTTCAATTAAGTGGCTAAGGAATGATGGAGTTATGACAACTCATGATGAAGACACAGAGAGTTATTTTGATGGAACTGGAGTGCACTGTGTTCTATGTCCTCGAAATCCTGACAAAGGGGAAAGCCTTATCCAAGGCACAGAAGTTGCTACCATGTTTACACATCATCAAAAGATCATAATCGTCGATAGTGATATGCCAAATAAAAAATCGGATAGTAGGAGAAGAATTTTGAGTTTCATTGGTGGTATTGATCTATGTGATGGGAGATATGACACACCTTTCCATTCCATTTTTGGTACCATAGGAACAGTGCATCATAATGATTTTCGCCAGCCAAACTTCGAAGGAGCCTCAATCGATAAAGGCGGACCGAGAGAGCCTTGGCATGACATACATTGTCGCCTAGAAGGACCAATTGCAAGGGATGTTTTAAAGAATTTTGAGCAAAGGTGGAGAAAACAAGGTAAGAAGGATGTTTGTCTTGTTGAAATCGACTCACTTGTTGACACTTTTGTTCCCTCATCACTAGATAAGTTCCCTGAAGATGATGAAGAAATATGGAATGTTCAGTTATTTCGATCAATTGATGGAGGAGCAGCTTTGGGCCTCCCAAATTCTGCAGAAGAAGTAGCAAGGTTGGGTCTTATGAATGAAAAAGAACATATCTTTGACTGCAGCATCCAAAATGCTTATATTACTGCTATCAGGAGAGCTAAGAGTTTTATCTATATAGAAAATCAGTATTTTATGGGAAGCTCTTTTGGCTGGAATTCTGGCAACCTCCAAGTTCAGGAGGTGGGAGCTTTGCATCTTATTCCGAAGGAATTGTCTCTCAAGATTGTCAGCAAGATTGAAGCAGGAGAAAGGTTTAGTGTATATGTAGTGATTCCAATGTGGCCAGAGGGTATTCCTGAGAGTAACTCTGTTCAAAGCATGTTGAGTTGGCAGAAGGAGACAATGGATATGATGTACATTGATATAATCCAAGCTCTACGTGCCAAAGGGATTACTGCTGACCCAAAAGACTATTTGAGTTTCTTTTGCCTTGCAAATCGTGAAAAGAAGAATAATGGAGAATATAAACCTTCTAAACACCCACAATATGACTCAGATTATAACAGAGCTCAACAAGCAAGGAGATTCATGATCTATGTACATGCTAAAATGATGATAGTTGATGATGAATACATAATTATTGGATCTGCCAATATCAATCAACGATCCATGGATGGAGCTAGAGATACAGAGATTGCGATGGGAGCTTACCAACCATATCACATAGAAAGAAATGAGCCAAACAGGGGTCAGATACATGGCTTTAGAATGGCCTTGTGGTACGAGCACTTGGGTTTTCTAGATGGCTCTTTTCTTGTTCCACAGAGTTTGGAGTGTATCAGACTTATAAACAATATTTCAAGAAGGTATTGGGACCTTTACTGTAGCGAAACCCTTGATGAAGACTTGCCTGGACATTTGCTTAGTTATCCCATTAAAGTAACAGAAAGTGGTAATGTCACAACGCATCTTGGTGTAGAGCACTTTCCGGACACAAAGGCACGAATTCTTGGGTCCAAATCGGAACTTCCTTTTGTCTTGACTACTTAA 2454 0.3904 MAKIREGTLLHGVLHVTIFEADNLYVNDCCNCFPKLSEETFSSGKIGGCRIYTTINLGSTIVGRTRYVNQNEHFNFQWHQSLRIYTAHIASEVVFHIKEDDTIIGAKVIGRAYFPVEELVNGENKDIWLEILNKKHKPLKARPRIHVKLQFFNVTKDINWSQGIKSLDFAGLTHSYFPQRSGCRVTLYQDTHIPTTFFPEILLTKGRYYELHQCWEDIFNAISKAKQLIYIAGWSLCTKITLVRESTCKKQESSDLNLTLGELLKKKASEGVKVLMLIWDDRTSIKWLRNDGVMTTHDEDTESYFDGTGVHCVLCPRNPDKGESLIQGTEVATMFTHHQKIIIVDSDMPNKKSDSRRRILSFIGGIDLCDGRYDTPFHSIFGTIGTVHHNDFRQPNFEGASIDKGGPREPWHDIHCRLEGPIARDVLKNFEQRWRKQGKKDVCLVEIDSLVDTFVPSSLDKFPEDDEEIWNVQLFRSIDGGAALGLPNSAEEVARLGLMNEKEHIFDCSIQNAYITAIRRAKSFIYIENQYFMGSSFGWNSGNLQVQEVGALHLIPKELSLKIVSKIEAGERFSVYVVIPMWPEGIPESNSVQSMLSWQKETMDMMYIDIIQALRAKGITADPKDYLSFFCLANREKKNNGEYKPSKHPQYDSDYNRAQQARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDTEIAMGAYQPYHIERNEPNRGQIHGFRMALWYEHLGFLDGSFLVPQSLECIRLINNISRRYWDLYCSETLDEDLPGHLLSYPIKVTESGNVTTHLGVEHFPDTKARILGSKSELPFVLTT* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2823 817 Pfam C2 domain 12 130 IPR000008 -
Amo18g2823 817 ProSiteProfiles C2 domain profile. 1 129 IPR000008 -
Amo18g2823 817 SUPERFAMILY Phospholipase D/nuclease 155 440 - -
Amo18g2823 817 Pfam Phospholipase D Active site motif 665 691 IPR001736 GO:0003824
Amo18g2823 817 Pfam Phospholipase D Active site motif 333 372 IPR001736 GO:0003824
Amo18g2823 817 PANTHER PHOSPHOLIPASE D 7 817 - -
Amo18g2823 817 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 154 IPR035892 -
Amo18g2823 817 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 664 691 IPR001736 GO:0003824
Amo18g2823 817 Gene3D C2 domain 9 163 IPR035892 -
Amo18g2823 817 Pfam Phospholipase D C terminal 738 808 IPR024632 -
Amo18g2823 817 SUPERFAMILY Phospholipase D/nuclease 509 747 - -
Amo18g2823 817 Gene3D Endonuclease Chain A 204 449 - -
Amo18g2823 817 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 333 372 IPR001736 GO:0003824
Amo18g2823 817 Gene3D Endonuclease Chain A 479 712 - -
Amo18g2823 817 PANTHER PHOSPHOLIPASE D 7 817 IPR015679 -
Amo18g2823 817 SMART pld_4 333 372 IPR001736 GO:0003824
Amo18g2823 817 SMART pld_4 664 691 IPR001736 GO:0003824
Amo18g2823 817 PIRSF PLD_plant 2 817 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Amo18g2823 817 SMART C2_3c 13 128 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2823 Amo-Chr18 119921172 119941397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2823 9 817 Phospholipase D Gene Family (Wang group) AT3G15730 61.179 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2823 K01115 - qsu:111988169 1105.51