Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2777 CTAATTTCATCCCTACCCTATCGACGTCCTTTCACATACACAAAATCACAATCAAACGAGTTGCTCCTCTCTCCTTCATCGAGCTTCTCCGTCGCACGAGCTTCTTCTCCTTTCCTCACTCACAGCGCCACCGCCGCCACCCTAACAACCGCAGCTACCTTCTCCTTCTTCTCCTCTCTTTTAAACACTGAACCAGTAGCACATAGCCCCTGTCTCTCTCGTTCTTTCTCATTCGCAGAACAAATCAAGCTCAAGCTCCTGTTCTCTTCGTCTCAGGTGAGCTCCAGCACGCCGGCGCCACCTGTAGCAGCGTCTGTTCCCACCACCGTGCCTCTCTCTCCTTTTATTTCCACTCCATTCTGGCTCGGATATCTTTTCAGCGCCGCAGCCATCATCTCCTCCAGTCAATGCTTCCAGAAAGAAAGCAAAAAGGAAAAGATATTGAAGGTGAAGGTGTATGCGGACCGCATGTCCCAACCATCTCGTGCCGTTCTTATCTTCTGCAAAGTTAATGGAATAGAATTCGACGAGATTAGAGTTGAAATCTCCAAAAGACAGCAGTTATCTCCCGAATTTGCAGCTATCAACCCTTTCAAGAAACTCCCTGCTATTGTTGATGGAAGGTTCAAGCTATTCGAGAGACGTGTTCTTTTCTTCTTGGCAGTTACATTATCTAACTCTGACTTTCCAACACAGATTTCGTGGATGGAGAAGTTTTTGCGGAAGAGAACTGAGATCACTGCGCCTGTTCTAATGACACCAGAAGTGTTTGCTTCTTCAATGGCATATTTAGAACCACATTTTAATCCTAATAAGATGAAACATGGTGCTCCGGGAGATCAAATTTGCCATGCGGGTGACCTGGAAAACATAGTTGCTAATGCAGATGGAGTTGCAGAAGCAACAATTGTCGACAATCAGATACCACTGATTGGCCCCAATCCAGTAGTTGGAAGAGCCTTGGTGGTTCATGAGCTTGAGGATGACCTTGGAAAAGGTGGGAAGGAACTCAGCTTGAGCACTGGAAATGCTGGTGGAAGATTGGCATGTGCAAGTGAAGGCAGAACAGATGATGCCAAACGAAGGGGTGATGTATTTGCTCGAGCATTTTCTGCTCACTTGGCATGGTAA 1131 0.4668 LISSLPYRRPFTYTKSQSNELLLSPSSSFSVARASSPFLTHSATAATLTTAATFSFFSSLLNTEPVAHSPCLSRSFSFAEQIKLKLLFSSSQVSSSTPAPPVAASVPTTVPLSPFISTPFWLGYLFSAAAIISSSQCFQKESKKEKILKVKVYADRMSQPSRAVLIFCKVNGIEFDEIRVEISKRQQLSPEFAAINPFKKLPAIVDGRFKLFERRVLFFLAVTLSNSDFPTQISWMEKFLRKRTEITAPVLMTPEVFASSMAYLEPHFNPNKMKHGAPGDQICHAGDLENIVANADGVAEATIVDNQIPLIGPNPVVGRALVVHELEDDLGKGGKELSLSTGNAGGRLACASEGRTDDAKRRGDVFARAFSAHLAW* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2777 376 CDD Cu-Zn_Superoxide_Dismutase 266 350 IPR001424 GO:0006801|GO:0046872
Amo18g2777 376 Gene3D Glutaredoxin 148 228 - -
Amo18g2777 376 Pfam Glutathione S-transferase, N-terminal domain 149 215 IPR004045 -
Amo18g2777 376 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 265 351 IPR024134 -
Amo18g2777 376 PANTHER SUPEROXIDE DISMUTASE [CU-ZN] 265 351 - -
Amo18g2777 376 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 148 229 IPR004045 -
Amo18g2777 376 Pfam Copper/zinc superoxide dismutase (SODC) 265 351 IPR001424 GO:0006801|GO:0046872
Amo18g2777 376 Gene3D Superoxide dismutase, copper/zinc binding domain 252 362 IPR036423 GO:0006801|GO:0046872
Amo18g2777 376 PRINTS Cu-Zn-superoxide dismutase family signature 284 293 IPR001424 GO:0006801|GO:0046872
Amo18g2777 376 PRINTS Cu-Zn-superoxide dismutase family signature 303 325 IPR001424 GO:0006801|GO:0046872
Amo18g2777 376 PRINTS Cu-Zn-superoxide dismutase family signature 328 354 IPR001424 GO:0006801|GO:0046872
Amo18g2777 376 SUPERFAMILY Cu,Zn superoxide dismutase-like 261 351 IPR036423 GO:0006801|GO:0046872
Amo18g2777 376 SUPERFAMILY Thioredoxin-like 146 216 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2777 Amo-Chr18 117950271 117952751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2777 147 246 Glutathione S-transferase Gene Family AT5G41210 58.824 7.08e-32 119