Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2761 ATGAATAAAGGAGGACCAGTAGGTGGAGGAGGGTTGGGGGTTGGTGGAAGTGGGCCTACTGCAGCGGCTGCTGCAGCTGCTGCTCAGAAGCAGAAGACATTGCTGCAGAGGGTGGAAGGTGACATTGCCAATATTGTGGACAATTTCAGCCACCTTGTCAATGTTGCCAGGGTTAATGATCCACCTGTTAGAAATTCACAAGAATCTTTTATGATGGAGATGCGTGCTGCTAGGATGGTTCAGGCAGCTGATTCGTTACTTAAGTTGGTCTCGGAGCTGAAGCAAACAGCTATCTTTTCAGGGTTTGCTTCTCTTAATGACCATGTAGAACAAAGAAGGGTTGAATTTAACGAACTCGGGGAGAAAACTGATCGTTTGTTGTCTAGAATTGGAGAAGAAGCTGCTGCAAGTCTTAAGGAACTTGAAACTCATTATTCTTCTTCTGCGCAGAAGAATATTTAA 462 0.4502 MNKGGPVGGGGLGVGGSGPTAAAAAAAAQKQKTLLQRVEGDIANIVDNFSHLVNVARVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRRVEFNELGEKTDRLLSRIGEEAAASLKELETHYSSSAQKNI* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2761 153 Pfam Surfeit locus protein 5 subunit 22 of Mediator complex 36 135 IPR009332 GO:0003712|GO:0006357|GO:0016592
Amo18g2761 153 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22 1 152 IPR009332 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2761 Amo-Chr18 117362992 117367396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2761 K15139 - gmx:100807971 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2761 18 117362992 117367396 Amo18g2761 18 117362992 117367396 ECH
Amo18g2761 18 117362992 117367396 Amo07g1449 07 39822520 39826672 hybridization