Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2755 ATGAGCCACAATATTCTTAGTCGTAGTGTACCCTTTTTGTCCATTAAAGATGGGAGTTTACCTATAGAACTTGTAACCATATCTCATATAAATTTGTCATTCAACTTTTTTGAGTGTCCAAAGGCTACAAGATTTTTTATGCAAAATCAATTATTGGTAATACTCCAATGTCTGTCAACACTTCCGTTCAATATTAAAATACCCAAAAAACCAAGGCACCTAGTATATTTTGTTTTATTCGATGCACCAAGAAGGTTAAGGTTGAACCCATTTCAGAAAAGAATGGAGACTTGTTTTCCACATGGAACTATGATGGTAAAATTGCATTTGAAGACATCATCGAAGCAACACAGGACTTTTATATCAGATATTGCATATGAACTGCTTCTAAATGGCAAAATTGTTGCATTGAAGAAACTTCACCGAAGGGAGTCACAAAATCCATCTTTTGACAAGAGCTTCCGAAACGAGATAAAGATGTTGTCACAAACCCGTCATAGAAACATTGTCAAGCTCTATAGATTTTGTATCCACCATTGGTGCAAGTTTTTGGTATACAAATACATGGAAAGAGGAAGCTTATTTTATGCGTTGAACATGGATGATGAAGAAGCTAAAGAGATACGTTGGATCAAGAGGGTGGATATCATTAGAGGAACAGCTAATGCATTGTCTTACATGCATCATGATTGTTTTCTACCAATAGTTCACAAAGATGTAACAAGCAACAACATTTTGTTGAACTCAGAGTTGCATGCTGTTATATTACAAGTTGGAACATCCCACCTTGCACCAGAGTTGGCTTATACAATGATTGTGACAAAAAAGTGTGACGTCTATAGTTTTGGAGTGGTGGCATTGGAAACTTTAATGAGAAGGCACCCAAGAGAGTTAATCTCATCTTTGCTAGATGACTCTTCTAACAAAAACATAGTGATAAAAGATCTCTTGGATCTACACATCCGTTTACCGTTAAGTCAAAAAGAAACTCAAGATATAGTTCATATAGTAACACTGGTATTAACATGCTTGTGTTCTAATCCAAAGTCAAGACCATCAATGCAGGAAGTGGGGCACGAGCTTTCTACTTCTAAACAGTCACTGTCGTTGCCTTTCGCAAATATTACAATTCATCAATTGATAGCATAA 1149 0.3594 MSHNILSRSVPFLSIKDGSLPIELVTISHINLSFNFFECPKATRFFMQNQLLVILQCLSTLPFNIKIPKKPRHLVYFVLFDAPRRLRLNPFQKRMETCFPHGTMMVKLHLKTSSKQHRTFISDIAYELLLNGKIVALKKLHRRESQNPSFDKSFRNEIKMLSQTRHRNIVKLYRFCIHHWCKFLVYKYMERGSLFYALNMDDEEAKEIRWIKRVDIIRGTANALSYMHHDCFLPIVHKDVTSNNILLNSELHAVILQVGTSHLAPELAYTMIVTKKCDVYSFGVVALETLMRRHPRELISSLLDDSSNKNIVIKDLLDLHIRLPLSQKETQDIVHIVTLVLTCLCSNPKSRPSMQEVGHELSTSKQSLSLPFANITIHQLIA* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2755 382 Gene3D Transferase(Phosphotransferase) domain 1 261 370 - -
Amo18g2755 382 Gene3D Transferase(Phosphotransferase) domain 1 190 260 - -
Amo18g2755 382 Gene3D Phosphorylase Kinase; domain 1 122 189 - -
Amo18g2755 382 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 129 380 - -
Amo18g2755 382 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 129 380 - -
Amo18g2755 382 ProSitePatterns Tyrosine protein kinases specific active-site signature. 235 247 IPR008266 GO:0004672|GO:0006468
Amo18g2755 382 Pfam Protein kinase domain 131 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g2755 382 ProSiteProfiles Protein kinase domain profile. 93 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g2755 382 SUPERFAMILY Protein kinase-like (PK-like) 130 368 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2755 Amo-Chr18 117220356 117221793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2755 84 357 Receptor kinase-like Gene Family AT5G65700 33.775 1.58e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Amo18g2755 Pkinase 1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2755 - - ahf:112752745 333.183