Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2748 ATGAGAACACCATCTGTGGTGGCAATTTTGGGGTCGACTCTGACCGGGGAGTTTGAGGATGTGAAGCTTATGAATGAGCTTCTTACTAAGAAGAATAAGAAGACAGGATGGAATACCCCGACTCATGTTGATGCTGCCAGCAGAGGGTTCATTGCTCCATTTCTCTACCCTGATCTTGAGTGGTATTTTCGCTTACCATTAGTGAAGAGCATCAATGTTAGTGGTCATAAGTATGGTCTTGTCTACCCCTGTGTCGGTTGGGTTGTTTGGAGGAGGAAAGATGACTTGCCAGAGGAACTTGTTTTTCACATAAACTATCTCGGATCGGATCAGCCAACATTTACCCTCAATTTCTCCAAAGGCTCTAGTCAAATTATTGCTCAATTTTACCAATTTATACGGCTTGGCACTGAGGGCTACAAAAATATCATGGAGAACTGCAGGGAGAACGCAAGAATTCTGAGGGAGGGAATCGAGAAAACGAGCCAGTTCAACATCGTCTCCAAGGACGCTGGCGTGCCGCTTGTCGCCTTCTCTTTGAAAGACAGCAGCCAACACAGTGTTTGA 567 0.455 MRTPSVVAILGSTLTGEFEDVKLMNELLTKKNKKTGWNTPTHVDAASRGFIAPFLYPDLEWYFRLPLVKSINVSGHKYGLVYPCVGWVVWRRKDDLPEELVFHINYLGSDQPTFTLNFSKGSSQIIAQFYQFIRLGTEGYKNIMENCRENARILREGIEKTSQFNIVSKDAGVPLVAFSLKDSSQHSV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2748 188 Gene3D - 2 160 IPR015421 GO:0003824
Amo18g2748 188 PANTHER GLUTAMATE DECARBOXYLASE 5-RELATED 5 188 - -
Amo18g2748 188 Pfam Pyridoxal-dependent decarboxylase conserved domain 4 181 IPR002129 GO:0016830|GO:0019752|GO:0030170
Amo18g2748 188 SUPERFAMILY PLP-dependent transferases 3 183 IPR015424 -
Amo18g2748 188 PANTHER GLUTAMATE DECARBOXYLASE 5 188 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2748 Amo-Chr18 117143190 117144653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2748 3 188 Calmodulin-binding Proteins AT3G17760 83.871 1.44e-111 325