Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2747 ATGGTGATCACCTCCGCTGTCACAGATCCTGAAGAACAAACACAAAGCTTGCACTCTACTTTTGCTTCCAGATATGTTCGTGACCCTATTCCCAGGTTCAAGATGCCAGAGAAGTGTATACCAAAGGATGCAGCATATCAGATCATAAACGATGAGTTGATGTTGGATGGAACACCAAGGCTTAACTTGGCATCTTTTGTGACCACTTGGATGGAGCCTGAGTGTGATAAGCTCATCATGGCTTCGCTTAACAAGAACTACGTTGCCATGGATGAGTATCCTGTCACCACTGAGCTCCAGAATAGGTGCGTTAATATGATAGTGCACCTATACCATGCTCCTATCGGTGATGATGAGGCTGCAGTTGGTGTGGGAACCGTCGGATCATCAGAGGCAATAATGTTGGCAGGTCTAGCTTTTAAAAGGAAATGGCAGGCAAAGAGAAAAGCAGAAGGCAAACCTTATGATAAGCCTAACATAGTTACCGGCGCTATTTGTGCAGGTTTGTTGGGAGAAGTTTGCACGGTATTTCGAGGTTGA 540 0.4537 MVITSAVTDPEEQTQSLHSTFASRYVRDPIPRFKMPEKCIPKDAAYQIINDELMLDGTPRLNLASFVTTWMEPECDKLIMASLNKNYVAMDEYPVTTELQNRCVNMIVHLYHAPIGDDEAAVGVGTVGSSEAIMLAGLAFKRKWQAKRKAEGKPYDKPNIVTGAICAGLLGEVCTVFRG* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2747 179 Gene3D - 69 177 IPR015421 GO:0003824
Amo18g2747 179 PANTHER GLUTAMATE DECARBOXYLASE 2 165 - -
Amo18g2747 179 Gene3D - 1 68 - -
Amo18g2747 179 SUPERFAMILY PLP-dependent transferases 14 163 IPR015424 -
Amo18g2747 179 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 166 IPR002129 GO:0016830|GO:0019752|GO:0030170
Amo18g2747 179 PANTHER GLUTAMATE DECARBOXYLASE 2 165 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2747 Amo-Chr18 117141420 117143121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2747 1 164 Calmodulin-binding Proteins AT5G17330 81.098 2.65e-93 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2747 K01580 - gmx:100783047 296.975