Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2683 ATGTCATGGATTGGTGTACTAAACTTCTACAATTGGAACCGTGTTAAGCTGATATATTGTGATGGAGCTTCATTCACTGGAGACGCTATCTTCGATAATGGGACAACAAGGCTTCATTTCAAGGAACTCATTCAATTGAAGGTGCAACGTGTTACGCAGTGTAGCAAAACAGAATGCATCAACTTCATAGTTCAGATACCATTGCACTTTGAAGCTCTCCTTTCTCATCCAGATACTAATCACAGTAAACTCAAAAAATGTAAGGGTTTGAAGTCCAAGATTCTTGAGCTGGAGACATCTCTCAAGTCTTCCTTAGAAAAACGTGCCTTTGAAAGGCAACGGAGAATTAGGACTCAACAGTATTTATCTGAAAATTTGAAGCTGACATATTACCCTATGGCACCGATTGGTACCATCTGCTCATGCTTCTCTACGAGGAATGGGACACCGAGACAATCGTTACTTGTCCCACTTGCTACAGCCTGTTTGGTTTTTAATGCCACTCGTGTTTCGCCAGCATATTTTGAGGGTCTAATCTTAAGAAACTATAAAAGCTTGTAG 561 0.4046 MSWIGVLNFYNWNRVKLIYCDGASFTGDAIFDNGTTRLHFKELIQLKVQRVTQCSKTECINFIVQIPLHFEALLSHPDTNHSKLKKCKGLKSKILELETSLKSSLEKRAFERQRRIRTQQYLSENLKLTYYPMAPIGTICSCFSTRNGTPRQSLLVPLATACLVFNATRVSPAYFEGLILRNYKSL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2683 186 PANTHER TRNA (ADENINE(37)-N6)-METHYLTRANSFERASE 71 178 - -
Amo18g2683 186 Pfam Pectinacetylesterase 8 41 IPR004963 GO:0016787
Amo18g2683 186 PANTHER UNCHARACTERIZED 71 178 IPR040372 -
Amo18g2683 186 ProSiteProfiles TsaA-like domain profile. 133 186 IPR023370 -
Amo18g2683 186 SUPERFAMILY YaeB-like 129 178 IPR036413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2683 Amo-Chr18 113955471 113957650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2683 8 41 Carbohydrate Esterase AT5G23870 64.706 3.56e-10 56.2