Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2665 ATGTGGAGATTTAACCCATTTACACACAAGGAGGCAGCTGGCCTTGAAGGCCGAGTTATAGATGTCGGCAATCTTAAGATAAATGTCCAGAAGGCCATCGCAGAAGGAGGTTTCTCTTGTGTTTACTTAGCACGTGATGCTTTCCATATGTCAAAGCAATATGCGTTGAAGCACATCATATGCAATGATGATGAATCACTTGCATTGGCAAAGAAGGAGATATCTGTGATGAAGTCACTGGTAGGACATCCCAATGTAGTCACACTTCATGCTCATACAATATTTGATATGGGTAGGACAAAAGAGGCATTTCTTGTAATGGAATATTGCGAGAAGTCTCTTGTTAGTGTGCTGGAAAGCCGAGGAGCAGGTTATTTTGATGAGAACCAGGTTCTCTTAATCTTCAGGGATGTATGTAATGCAGTTTTTGCTATGCACTGCCAGTTCCCACCTATTGCTCACCGAGACTTGAAAGCAGAGAATCTTTTATTAGGTTCAGATGGTTTATGGAAGTTGTGTGACTTTGGAAGCACTTCCACCAATCACAAGCGTTTTGAGAAGCCAGAAGAAATGGGAATCGAGGAAGACAATATCAGGAAGTACACAACCCCTGCCTACAGGGCCCCTGAGATGTGGGATCTGTTCCTTAGAGAAGTCATCAACGAGAAAGTGGACATATGGGCACTAGGGTGTCTCCTTTTTCGCATATGCTATTTCAAAAGTGCTTTTGACGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCTGATTTGCCTAGATACAGTTCATCAGTCACGGATTTAATCAGAGACATGCTTCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTTAATGAGCAGCTACCTATTACTTTACAGAAGTCATTGCCTGACAGGCCACCTGAGTTGCCTGCTTCCAACCATCCGGAAGGTTCTTCAATGTCCACTAACAAATCACACCCAGCACCTAGCAGGAATCCACCTCCCCCGCCTTCATCTGTAGAATCCAAACCATCGGTCCAGGCATCTGTTGCTTCTAGGGGTGGTGGAAATGGGGGGCAGCTTGGTGCTTTCTGGTCCACTCAGCATGCAAATGATTCAATCGTTTCCAAGGAAAAGAGTAAACCTGTATTTGATGAAGAACCATCTAGTAACAATAACACATTAAAGGATGATAGAGTTCATCCAGAGAATGATCAGTTACCCAAAAATGTTGGTACTAACAAAGTGGCCAACGCACCAACTCATTCAGTAAAAAGCAGTGTACATGGAAAGTCACACAAGCCTGACACTGCATCATCCAAGGATTTCGAATTGAACTTTTTTAAGGATAAAGGTCAGATGAATGAGAGGGGATTGTCAAATATAGACAATACAGCTACTTTTCAGGATCATGCTTTTAACACTTTTGTTGCAGAATTTGATACTGCTAAGCTCAGTCCTGGACTTAAGTCTGAAAGGGAAGAAACATTAGAAGCTGAGGTGGAGAAACTGAAAGGGCAGTTGAAGGAAGCAAACATAGCCAAAGCTGAAATCACTTCAAAGTATGAAAAGCTTTCTGCTATATGCAGATCGCAAAGGCAAGAATTACAGGATCTAAAACAGGCACTTGCAGCAAAAACTCCCTCACCAAATAGGGAGGGTATGAGGACCTCTCCTGCACTTACATCATCTGCATCCACGAAGGAGCAGATTGGCGAAACCGTTTGGGAACTTCAGCAGGATAAAACTGAGAGGAAGACTCCTGGTTCAGAACCAAAGTCATGGCAGGCTTTTCCTGAGGAACCACGACAACAAACCTCCTTTTCAGCTGACAATACTTCAAAATCTGTCAGGACTAGAAATACCCAGCAGAAGCCGCAGCCTGCTCCAGTTGCTGCTAACTTCGATTCTTGGGGTTTTGGATCTGATAACTTCAGTGCTGTAAGAGCTAGTACCCCACAGATGCCAAGACCTGGTGAAGGGAGTAATTCTCAGGCATTTGGTGAAGCAAAGGCATTTGAGAAGAAATCAACTACCCCCCCTGCTGGATGGGCTGGATTTTAA 2073 0.439 MWRFNPFTHKEAAGLEGRVIDVGNLKINVQKAIAEGGFSCVYLARDAFHMSKQYALKHIICNDDESLALAKKEISVMKSLVGHPNVVTLHAHTIFDMGRTKEAFLVMEYCEKSLVSVLESRGAGYFDENQVLLIFRDVCNAVFAMHCQFPPIAHRDLKAENLLLGSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPRYSSSVTDLIRDMLQARPDDRPDITQVWFRVNEQLPITLQKSLPDRPPELPASNHPEGSSMSTNKSHPAPSRNPPPPPSSVESKPSVQASVASRGGGNGGQLGAFWSTQHANDSIVSKEKSKPVFDEEPSSNNNTLKDDRVHPENDQLPKNVGTNKVANAPTHSVKSSVHGKSHKPDTASSKDFELNFFKDKGQMNERGLSNIDNTATFQDHAFNTFVAEFDTAKLSPGLKSEREETLEAEVEKLKGQLKEANIAKAEITSKYEKLSAICRSQRQELQDLKQALAAKTPSPNREGMRTSPALTSSASTKEQIGETVWELQQDKTERKTPGSEPKSWQAFPEEPRQQTSFSADNTSKSVRTRNTQQKPQPAPVAANFDSWGFGSDNFSAVRASTPQMPRPGEGSNSQAFGEAKAFEKKSTTPPAGWAGF* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2665 690 CDD STKc_GAK_like 26 298 - -
Amo18g2665 690 MobiDBLite consensus disorder prediction 410 429 - -
Amo18g2665 690 PANTHER SERINE/THREONINE PROTEIN KINASE 1 680 - -
Amo18g2665 690 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g2665 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Amo18g2665 690 Gene3D Transferase(Phosphotransferase) domain 1 10 306 - -
Amo18g2665 690 MobiDBLite consensus disorder prediction 377 408 - -
Amo18g2665 690 MobiDBLite consensus disorder prediction 642 664 - -
Amo18g2665 690 MobiDBLite consensus disorder prediction 301 442 - -
Amo18g2665 690 SMART serkin_6 27 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g2665 690 MobiDBLite consensus disorder prediction 554 580 - -
Amo18g2665 690 MobiDBLite consensus disorder prediction 602 633 - -
Amo18g2665 690 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g2665 690 Coils Coil 497 545 - -
Amo18g2665 690 SUPERFAMILY Protein kinase-like (PK-like) 29 340 IPR011009 -
Amo18g2665 690 PANTHER NUMB-ASSOCIATED KINASE, ISOFORM A 1 680 - -
Amo18g2665 690 MobiDBLite consensus disorder prediction 542 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2665 Amo-Chr18 112505956 112510125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2665 26 292 CBL-interacting serine-threonine protein kinases AT5G45810 30.282 1.61e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Amo18g2665 Pkinase 5.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2665 K08853 - gmx:100808507 1022.69