Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2644 ATGTCGTCGTCTCACTTGTTATCGTCTCACCAACAATTGGCTCGTCCGACAGAGATCTATTTCGTGTTGGAGTTCAATGAAGGCGATGAGTTATTTACCAAGGTTTCGAAAGGGAGGTTCAGTGAGGATCTCACCCGCAAGTATTTCCAGCAGCTTATCTCCGCCATAGGGTACTGCCACTCACGCGACATTTTCCACCGTGATTTGAAGCCAGAGAATCTCTTGCTTGATGAGAATGGGAATCTTAAGGTCTCCGATTTCGGACTCAGTGCCGTCAAAGACCAGGTCAGCCCTAAAATACTAAAGCCGGAGATGTTTGCCAGACCGCAGTTCACTAGCTCTCCAGTCACCAGGGACCAAATCCAGTTTCAAGTGCACAAGGAAGAACATAAGGAAATTCAGGTTCAATATCCTGGAGTTCAGCATATCATAATGACAGATATCCATAACTTGCAAGCATTTGCTTTGTACATGCAAAAGGCAGATATCAAATTTGATCTATGTTCAATAACAACAGAAATGAAAACACAGTTCATTAAAAGGAAACAAAATACTATGAAGCTCGGAGGAGCTATTTCAGTAGCTCTTGACTTGAATCAAAATGCTGCCAAGGTAGCTGCGGCTTTGGAAACTGCTGCATTCTCCAAAATCCTGCACTTGTTCTTACTCCAGTTATCCCAAGCTTTGCATATTCGGAAGTCAAAGAAGGAGCGCAATGCTGCTGGAATATCATTTGGAAGTAGTAGTGCAGATACATTTGGTGATGTTGGTCTTCAAACTGTGATGACTTATCTCCGAAATTCAAAAGAAATTTTCTCTACTTTCACAGTCAGAAATAGAAGTGTCAGTTTTGATATTATTAGTAGTAAATTCTAA 876 0.4155 MSSSHLLSSHQQLARPTEIYFVLEFNEGDELFTKVSKGRFSEDLTRKYFQQLISAIGYCHSRDIFHRDLKPENLLLDENGNLKVSDFGLSAVKDQVSPKILKPEMFARPQFTSSPVTRDQIQFQVHKEEHKEIQVQYPGVQHIIMTDIHNLQAFALYMQKADIKFDLCSITTEMKTQFIKRKQNTMKLGGAISVALDLNQNAAKVAAALETAAFSKILHLFLLQLSQALHIRKSKKERNAAGISFGSSSADTFGDVGLQTVMTYLRNSKEIFSTFTVRNRSVSFDIISSKF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2644 291 SMART serkin_6 2 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g2644 291 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
Amo18g2644 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Amo18g2644 291 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g2644 291 SUPERFAMILY Protein kinase-like (PK-like) 5 96 IPR011009 -
Amo18g2644 291 PANTHER - 4 111 - -
Amo18g2644 291 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 111 - -
Amo18g2644 291 Pfam Protein kinase domain 6 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2644 Amo-Chr18 110615716 110620066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2644 1 116 CBL-interacting serine-threonine protein kinases AT2G30360 54.701 9.45e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo18g2644 Pkinase 1.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2644 - K12761 ahf:112770193 269.24