Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2643 ATGGCAGAGAACACGGCAGCGAGGTTTATGTGCAGCTTCGGCGGCCAGATCAGGCACCACGATGGCGGCGGCAGTAACAACCACCAACACTTCTTTTACTACGGCGGCAACAACAGGATTCTCGAAGTCGATCGCAACATCAGCTTCCACGATTTGACCGCTGAGCTCTCCGCCCTCTGCGGAGGCGCTGCCATTAACTTCTTCAAGTATCTTATCCCCGGCGACGATCTCGACACACTCGTTACAGTCACCAACGATAGAGACCTCGGTTACATGATGAGGGAATATGATCTGCACTTCCGAGGTTCTGCTTCCGCTGACCGGATGAGAATCTTTCTTTTCTTCGATCCCGTCCACAACGGTGCTGCCGCAATAAATTCCTCCTACGAGTATCAGGCCGCGTTGGCGTTCACAATAATGGTGTTGGTGTGGGTGGAATTGACAGAAGAGGTAAAGAAGAAGGGAAGGGTCTATGTGTATAAAGAAATATTATATTATCATCTAAATCACTGGCAAGTTGTTGGGGCTTGTGGAGTTGTGGTGTATGGTAGTGTATGTGATCTTAATTTAGCCTGGGAACCTAGGAAGCGTTTTCTGCCTCTGTTGAGGACCAAGATTCAGGAGCTTGCTGAAACGATAAGATCTGTCTGCACCTATAAGTATAAGTCGTTTTATAAGTCGTTTATAGCGGCGGGGAACGACAGAGACATCAACAGGCTGAATGAGACGTCGCATTACGTCGGAGCGGCTAACTTTGAGAGGCCTTGCCTTCTACTATCTCGGCGAGTGAGTCATACCCTTCCTCCACCCGCCGCTAGAAGTGTTCAAATCCAAAACGATCCTAATTAA 849 0.4888 MAENTAARFMCSFGGQIRHHDGGGSNNHQHFFYYGGNNRILEVDRNISFHDLTAELSALCGGAAINFFKYLIPGDDLDTLVTVTNDRDLGYMMREYDLHFRGSASADRMRIFLFFDPVHNGAAAINSSYEYQAALAFTIMVLVWVELTEEVKKKGRVYVYKEILYYHLNHWQVVGACGVVVYGSVCDLNLAWEPRKRFLPLLRTKIQELAETIRSVCTYKYKSFYKSFIAAGNDRDINRLNETSHYVGAANFERPCLLLSRRVSHTLPPPAARSVQIQNDPN* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2643 282 Gene3D - 32 115 - -
Amo18g2643 282 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 8 122 - -
Amo18g2643 282 SMART PB1_new 27 116 IPR000270 GO:0005515
Amo18g2643 282 CDD PB1_UP2 10 114 - -
Amo18g2643 282 SUPERFAMILY CAD & PB1 domains 30 117 - -
Amo18g2643 282 Pfam PB1 domain 33 114 IPR000270 GO:0005515
Amo18g2643 282 PANTHER OS05G0427100 PROTEIN-RELATED 8 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2643 Amo-Chr18 110514515 110516875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2643 8 122 MAP Kinase Kinase Kinase AT5G57610 41.026 1.04e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2643 - - ahf:112710177 110.538