Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2607 ATGGGAACAAGCAGATTGAGACTGAGAGCTATGATGCTTCTTCTCTACATGACTTTAGCATCTGTTTCTCTCACTCGTTGTGATGCAGATAGATCAATGAGACTACTATTGAAAGGCCCTAATAAACATAGAAGGAACATAACCAACACTAAGATCACAAAGAAATTGAAAATGACAAAGAAAATTGACCTTAACCCAAGCACATTTTCATCAAACACACAACCATATAGTGTTAGCTCCCCATTTTCTTTGCCACCTTATGAATCACTACCTCCAGTTCCATTACCAGACAGCAATAACAACCCTCCATATTGTGTGTATCCACCTCCAACTTCACCTTCAGCCAACATTCCAACACCCACAGGGTATCAATCATCACCCCCTTACTATTACTCCTCACCAACAATTCCAACCCAAGGCCCACCACCAAGCCCCACAACAATCATTACCCCAGGCCCACCAGAGTCATTCCCTAGCCCAACAACAATTATCCCAGGCCCACCTGAGTCCTTCCCCAGCCCAACAACGCCTGACATTGTGCCAAGCCCACCAGAGAATGTGCCCGGCTCACCGGAGCCCATAGAGAATCCCCCAATTATTATACCAGGCCCACCTGGCCCATCAATGAGCCCGCCTTCTTTTGAGCCCACCCCACCGTACTACATTCCGTCCCCTTCTAGCGGTGGTGTCAACCCTGGCCCACCAACTATTTATCCGTCACCAACCGGAGGCAATGTCCCCAGCCCGGTAGTGTTTCAGCCGCCCGTGATTTACCCGCCACCAAGTGTTCCACCGCCGCCGAACATGGCTCCTAGCACGGCGTTGTGGTGTGTAGCCAAGCCATCAGTCCCTGACCCAATTATCCAAGAGGCCATGAATTATGCTTGCTGGTCAGGGGCAGATTGCACTTCGATTCAGCCTAGTGGGCCTTGTTATGAGCCCAACACTGTTTTTGCACATGCTTCATATGCTTTTAATAGCTATTGGCAAAGGACTAAGGGTGCTGGTGGCAATTGTGAATTTGGAGGGACAGCCATGTTGGTCGCTGTTGATCCAAGCTACGATGGATGCCATTTCACTTACAATTGA 1089 0.4894 MGTSRLRLRAMMLLLYMTLASVSLTRCDADRSMRLLLKGPNKHRRNITNTKITKKLKMTKKIDLNPSTFSSNTQPYSVSSPFSLPPYESLPPVPLPDSNNNPPYCVYPPPTSPSANIPTPTGYQSSPPYYYSSPTIPTQGPPPSPTTIITPGPPESFPSPTTIIPGPPESFPSPTTPDIVPSPPENVPGSPEPIENPPIIIPGPPGPSMSPPSFEPTPPYYIPSPSSGGVNPGPPTIYPSPTGGNVPSPVVFQPPVIYPPPSVPPPPNMAPSTALWCVAKPSVPDPIIQEAMNYACWSGADCTSIQPSGPCYEPNTVFAHASYAFNSYWQRTKGAGGNCEFGGTAMLVAVDPSYDGCHFTYN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2607 362 MobiDBLite consensus disorder prediction 115 193 - -
Amo18g2607 362 MobiDBLite consensus disorder prediction 134 193 - -
Amo18g2607 362 Pfam X8 domain 275 346 IPR012946 -
Amo18g2607 362 SMART X8_cls 275 359 IPR012946 -
Amo18g2607 362 PANTHER EXTENSIN-LIKE 143 361 - -
Amo18g2607 362 PANTHER BETA-1,3 GLUCANASE 143 361 IPR044788 -
Amo18g2607 362 MobiDBLite consensus disorder prediction 117 133 - -
Amo18g2607 362 Gene3D - 269 359 - -
Amo18g2607 362 PRINTS Proline rich extensin signature 84 96 - -
Amo18g2607 362 PRINTS Proline rich extensin signature 102 118 - -
Amo18g2607 362 PRINTS Proline rich extensin signature 125 137 - -
Amo18g2607 362 PRINTS Proline rich extensin signature 137 158 - -
Amo18g2607 362 PRINTS Proline rich extensin signature 161 177 - -
Amo18g2607 362 PRINTS Proline rich extensin signature 180 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2607 Amo-Chr18 108320991 108322823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2607 273 360 Glycoside Hydrolase AT3G13560 48.315 1.23e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2607 - - gmx:100794886 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2607 18 108320991 108322823 Amo18g2607 18 108320991 108322823 ECH