Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2603 ATGGCCAGCAACGGAGAGCAGAACCAAACTTCTGAAGCTGGAAGGCACCAAGATGTTGGTCACAAGAGCCTTCTCCAGAGTGATGCTCTATACCAGTACATTCTGGAAACCAGCGTGTACCCAAGAGAACATGAAGCCATGAAAGAATTGAGAGAATTGACAGCAAAGCACCCATGGAACATCATGACAACCTCTGCAGATGAAGGACAATTTTTGAACATGCTCCTTAAGCTCATCAATGCCAAGAACACCATGGAAATCGGTGTCTACACCGGTTACTCGCTTCTTGCCACTGCCCTTGCTCTTCCTGAAGATGGAAAGATCTTGGCCATGGATATTAACAAGGAGAACTACGAATTGGGTCTGCCAGTAATTAAAAAAGCCGGTGTTGACCACAAAATTACCTTCAAAGAAGGACCAGCTCTCCCTGTTCTCGACGAATTGGTTAAAGATGAGAAGAACCATGGAAACTACGACTTCATTTTCGTGGACGCAGACAAGGACAACTACCTGAACTACCATAAGAGGCTCATCGATTTGGTGAAGGTAGGTGGTGTGATCGGCTACGACAACACCCTATGGAATGGGTCTGTGGTCGCACCTGCCGATGCACCCATGAGGAAGTACGTTAGGTACTACAGAGATTTTGTGTTGGAGCTTAACAAGGCCTTGGCTGTGGACCCCAGAATTGAGATCTGCATGCTCCCGGTTGGTGATGGAATCACTCTCTGCCGTCGGATCAGCTGA 747 0.4752 MASNGEQNQTSEAGRHQDVGHKSLLQSDALYQYILETSVYPREHEAMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPEDGKILAMDINKENYELGLPVIKKAGVDHKITFKEGPALPVLDELVKDEKNHGNYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPADAPMRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITLCRRIS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2603 248 Pfam O-methyltransferase 36 247 IPR002935 GO:0008171
Amo18g2603 248 Gene3D Vaccinia Virus protein VP39 22 248 IPR029063 -
Amo18g2603 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
Amo18g2603 248 PANTHER O-METHYLTRANSFERASE-RELATED 4 248 - -
Amo18g2603 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
Amo18g2603 248 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 4 248 - -
Amo18g2603 248 CDD AdoMet_MTases 86 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2603 Amo-Chr18 107830177 107832910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2603 4 248 Monolignol Biosynthesis Gene Families AT4G34050 88.163 8.16e-167 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2603 K00588 - gmx:100811247 469.159