Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2557 ATGGAACATTCAAGATTCCAAAAAGTTCTTCCAAGCAATACAATGGAACCAAGAAATGGTGAATTCCAGCCTGGGTTGCAGCCAATGATGCAGGATCGACCGGATGACATGCATACAATTAGAAGACCACCTAATGTTGGTACGGCACAAGCCAAACCTGTACTTAATTTTTCCATACAGACAGGTGAGGAATTTGCTCTCGAATTTATGAGAGATAGGGTGAATCTTGGGAAGCCTATGTTTCCAAATGTCGGTGACACTAATTATACACCAGGTTATATGGATCTAAAAGGCATTTTAGGCATTAGTCATCCAACATCAGAAAGTGGATCAGACATTTCCATGCTTTCAATGGTTGACAAATATCCAAAAGAGTTTGAAAGAGTGAACACATCATTGCAGGGAGACAAAAGCAATTATGGGTCAATTCGATCAATACCAAGAACTTCAATGACTCAGGACAGTAGACAACTTGTGCAGAAGTATGGCTCTTCTCGAGGTTCCGATAGCTCATCAATGCTATTGAAGTTCCTTTGCAGCTTTGGTGGGAGAATATTACCTAGACCAAGTGATGGAAAACTAAGGTATGTTGGAGGTGATACACGTATTCTTCGTATAAGAAAGAATATATCTTGGCAGGAGCTCTTGCAGAAAGCATTATTAATGTATAGTCAGGTTCATGCAATCAAGTATCAGCTTCCGGGGGAAGATCTTGATGCTTTGGTATCTGTGTCATGTGATGAGGATTTGCAGAATATGATGGAAGAATGTAACCATCTAGAAGACAGAGAAGGATCACAAAAGCCTAGGATGTTTTTGTTCTCATTGAGTGATTTGGAGGACGCTCAATTTGGTCTCAGTGGTTTGGGTGATGATTCTGAGATCCAATATGTTGTTGCTGTTAACGGCATGGACATGGGATCAAGAAGAAACTCAACCCTGATTGGCGTGAACTTTTCAGCAAATGATCTGCATGATTTGGACAGGCAGAACACTGAAAGGGAGACTGGTAAAGTTGCTGTTGAATCTGTAGGTGTCAACAATTCTCTCCTGAATAACAAATTTGACTCATCACCAAATGTGGAATCCTTGCAACCAGTGCTACCTACTTCCTCAAATTCTTATGAAAGATATCCACAGTCCTTGCAACCAATGCACCATGGGGATCCTGTTGGTCAATATCATGTATCTAGATCTGTTGTTGAAGACATTCCTACTACTATGCCTCCTCGTGCACTGATTAATCAAGATGGGGTTTTTAGCAAAGGCCATCCACCAGTCGGATTACCAGTACATAATTCTGAAATACCACCAGTGGTCACAAAAAAGAAGGTTGATAGTTTGATTGAACAAGCAAGCGACCAGGGTAAAGTTTTATACTTGGAAACCCCATCCTCAGCTCCTACTCAACTATTTGATGGTTACATGAAAAATAATTTTCCCGAAGCAACAGCTGTAGTTACTATGCCAGAGGGCTATCCAATACCTCCGACAAAAAAGGACCAGCTACAGAACTATGAAGATGGTGCTTCTACATCTAACAGTGGCTTTGCTCCCACTTATGTCGACTCCCAGTCAAATGCTGTTGATTTTAGTTCTCTTAACCCTCCTCCTCTTCCTGAAAGAGTTTACTATTCAGAAAGGATTCCTAGGGAGCAAGTAGATTTGCTGAATCGGTCCACCAAGTCAGATGATTTACATGGTTCTCAGTTTAACATTTCCGATTTACTTTCTGATGCAAAACCCTCAGATTCAGTTACAGGATCTGACGACAACTTGCATAATGGGAATCAGCCTCTCCGATCTGAGGAATTGGGTGTTGCAGCAAAGCCTTTGCCTGCTGATGGCTATGCTACCAAACATCAAATATACAAACATTTTCCTGATCCAAGTAGCCAGTTGAAGTCAAAACTAACTGAGCATGTGAATTCTGAGTTGAAGAAGGTAGTACCAATAGTTGAAGGAAGTAATGATGTAGTAACTAAAGATCATGTTGTTAATTTTGAACCTGAAACTTATTGTAAAGATAATCATATCAAACACCGGCTTGATGAGATAAAAGATAGCAAATCAGAATCTGACTTTCCTACTTTGCATCAGGTTCCCTCTGCTAGGCATCTTGAGGATCCTGCTTCATGTCTTCCCGAGGTTGATTGGGGCAATGCCACTGTTACAGAATCTAATGAAAGTCGCATGGTTCAAGGACTACCTGTTTCTCTAAATGGGAACCAAACTACCAAAGATGATTTTCAACCTTCTTCAAGTGTTGCTTCAAAGACATCACAAGGTGACATTCTAATTGATATTGATGATCGATTTCCCCGTGAAGTGCTTAGTGACATGTATAAAGCTTTACTTGAAGAAGGTTTCTCGGGTCGGCATCCACTAACCTCGGATGGAGTAGGTCTAAGCATAAATGTGAAAAATCATGAACCTACACCTTGGGAATATTTTCACAAACTGGCACAAGAAGGACTCAATAATGTCTCTCTCATTGATCAGGATCATGTTAGTTTTTCACCTGCAATAGAAGAAGTGGAAGATGACGGTAGAACTCAACATGTTACGCCTCTAACAACAGGTGAAATATATCAGAAAGACTTACATGGAAGGGTTGAAACAGAAACTACTATTCTAAAGCCAAATGATCCCCTCGTGAAGGATACTGAAAGTATGCAATTTAATGCTATCATGGAAAACATAAGAGCACAGGAATCAGTTTTTGAGGATGGGAAGTTTGAAACAAGAAATCGTACACCTCCTGTTGATCCTCCCGTAAGTGAAATTGACCCGAATTCTTTGCAGGTCATAATGAATGAAGATCTTGAAGAGCTGAAGGAGCTGGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGCGTGGAACAGATGTTGCCATCAAAAGAATAAAGAAAAGCTGTTTCACCGGTCGATCATCAGAGCAAGAGAGACTGACTTTAGAATTCTGGCGGGAAGCTGATATTCTTTCCAAGCTTCATCACCCAAATGTTGTGGCATTTTATGGTGTAGTTCAGGATGGACCTGGAGGAACAATGGCCACTGTTACGGAGTACATGGTGGATGGTTCTCTTCGGCATGTATTGCTTCGCAAAGATAGGTATCTAGATCGTCGCAAGAGACTGATAATTGCTATGGATGCAGCTTTTGGAATGGAGTATTTACACTCAAAAAATATTGTTCATTTTGACTTAAAATGTGATAATTTGCTTGTGAACTTGAAAGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAGCGGAATACCTTGGTCTCAGGTGGCGTGCGGGGGACACTTCCTTGGATGGCACCGGAGCTGCTGAATGGTAGCAGCAACAAGGTGTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTGTGGGAAATTCTAACTGGTGAGGAGCCTTATGCCAATATTGCACTATGGTGCAATCATAGGTGGGATTGTTAA 3495 0.41 MEHSRFQKVLPSNTMEPRNGEFQPGLQPMMQDRPDDMHTIRRPPNVGTAQAKPVLNFSIQTGEEFALEFMRDRVNLGKPMFPNVGDTNYTPGYMDLKGILGISHPTSESGSDISMLSMVDKYPKEFERVNTSLQGDKSNYGSIRSIPRTSMTQDSRQLVQKYGSSRGSDSSSMLLKFLCSFGGRILPRPSDGKLRYVGGDTRILRIRKNISWQELLQKALLMYSQVHAIKYQLPGEDLDALVSVSCDEDLQNMMEECNHLEDREGSQKPRMFLFSLSDLEDAQFGLSGLGDDSEIQYVVAVNGMDMGSRRNSTLIGVNFSANDLHDLDRQNTERETGKVAVESVGVNNSLLNNKFDSSPNVESLQPVLPTSSNSYERYPQSLQPMHHGDPVGQYHVSRSVVEDIPTTMPPRALINQDGVFSKGHPPVGLPVHNSEIPPVVTKKKVDSLIEQASDQGKVLYLETPSSAPTQLFDGYMKNNFPEATAVVTMPEGYPIPPTKKDQLQNYEDGASTSNSGFAPTYVDSQSNAVDFSSLNPPPLPERVYYSERIPREQVDLLNRSTKSDDLHGSQFNISDLLSDAKPSDSVTGSDDNLHNGNQPLRSEELGVAAKPLPADGYATKHQIYKHFPDPSSQLKSKLTEHVNSELKKVVPIVEGSNDVVTKDHVVNFEPETYCKDNHIKHRLDEIKDSKSESDFPTLHQVPSARHLEDPASCLPEVDWGNATVTESNESRMVQGLPVSLNGNQTTKDDFQPSSSVASKTSQGDILIDIDDRFPREVLSDMYKALLEEGFSGRHPLTSDGVGLSINVKNHEPTPWEYFHKLAQEGLNNVSLIDQDHVSFSPAIEEVEDDGRTQHVTPLTTGEIYQKDLHGRVETETTILKPNDPLVKDTESMQFNAIMENIRAQESVFEDGKFETRNRTPPVDPPVSEIDPNSLQVIMNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANIALWCNHRWDC* 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2557 1164 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1067 1079 IPR008271 GO:0004672|GO:0006468
Amo18g2557 1164 ProSiteProfiles Protein kinase domain profile. 942 1164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g2557 1164 MobiDBLite consensus disorder prediction 499 521 - -
Amo18g2557 1164 PANTHER SERINE-THREONINE PROTEIN KINASE 91 1154 - -
Amo18g2557 1164 SUPERFAMILY CAD & PB1 domains 190 277 - -
Amo18g2557 1164 SMART PB1_new 189 276 IPR000270 GO:0005515
Amo18g2557 1164 Gene3D Transferase(Phosphotransferase) domain 1 927 1161 - -
Amo18g2557 1164 Gene3D - 193 275 - -
Amo18g2557 1164 MobiDBLite consensus disorder prediction 504 521 - -
Amo18g2557 1164 ProSitePatterns Protein kinases ATP-binding region signature. 948 973 IPR017441 GO:0005524
Amo18g2557 1164 CDD PB1_UP2 178 274 - -
Amo18g2557 1164 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 91 1154 - -
Amo18g2557 1164 MobiDBLite consensus disorder prediction 577 599 - -
Amo18g2557 1164 MobiDBLite consensus disorder prediction 577 604 - -
Amo18g2557 1164 SUPERFAMILY Protein kinase-like (PK-like) 927 1154 IPR011009 -
Amo18g2557 1164 CDD STKc_MAP3K-like 948 1154 - -
Amo18g2557 1164 MobiDBLite consensus disorder prediction 1 24 - -
Amo18g2557 1164 Pfam Protein tyrosine and serine/threonine kinase 943 1154 IPR001245 GO:0004672|GO:0006468
Amo18g2557 1164 SMART serkin_6 942 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g2557 1164 Pfam PB1 domain 191 274 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2557 Amo-Chr18 103271134 103279370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2557 49 574 MAP Kinase Kinase Kinase AT1G16270 40.299 1.51e-94 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Amo18g2557 PK_Tyr_Ser-Thr 4.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2557 - - aip:107612789 2244.54