Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2479 ATGTCGTCTTCTACGGATGCAGATGAAAAGAAGAAGGAATCGTTCAACGCAGAAGCAGCGTCACTTCTTGTCAATAACTTAAGGGCGACTTTCGCTTCGGGTACAACGCGAAGCTACGAATGGAGAGCGTCGCAGCTCAAGGCGCTTATCAAACTCTGCGACGCTCACGAGCAGCAGATCATCGACGCGCTTTACTCAGACCTCGCCAAACCGCCACTCGAAACCGTCGCTTACGAGATTGCTATGTTCAAAAATTCATGCAAAGCTGCACTCAAGGAGTTGAAACGCTGGATGACTTCAGAAAAGGTCAAAACTTCAATTGCAACCTTTCCTTCTACAGCTGAAATTGTATCCGAACCACTGGGGGTTGTGTTAGTCATCTCTGCATGGAACTATCCGTTTTTGTTGTCACTTGAACCAGTCATCGGAGCTATTGCAGCTGGTAATGCCTTGGTTCTAAAGCCATCAGAAATTGCTCCAGCCACATCATCACTGCTGGCAAAATTGCTAGGGGAGTACCTAGATAACTCCTGTACAAGAGTTGTTGAGGGAGCGGTTGATGAAACATCTGCATTGCTGCAGCAAAAGTGGGACAAAATTTTTTATACAGGAAATGGAAGGGTCGGGCGCATAGTGATGGCTGCTGCTGCTAAACATCTGACACCAGTAGTGCTGGAGCTTGGAGGAAAATCTCCGGTTGTTGTTGATTCAAATATTGATTTGAAGGTAGCAACTAGACGAATAATTGCTGGAAAGTGGGGTTGTAACAATGGACAAGCCTGTGTTTCTCCAGATTATATTATTACGACAAAAGACTATGCTCCCAAGTTGGTGGATTCCCTCAAGGCCGAATTGGAGAAGTTTTATGGAAAGAATCCGTTGGAATCAAAAGATTTGTCTCGTATAGTGAACTCCAATCACTTTGGTCGTTTGACAAAGTTCTTGGATGATGAGAAGGTTTCTGGGAAGATTGTATTTGGAGGCGAAAAAGATGAAAGCAAACTGAGGATTAGCCCCACTATTCTATTGGATATCCCACGAAATTCCCTGATAATGCGTGAGGAGATATTTGGTCCTTTACTTCCCATCATAACGGTTGATAAACTGGAAGAAAGCTTTGATGTGATCAATTCAGGAACAAAGCCTCTCGCTGCGTATTTGTTTACGACCAACAATAAGCTCAAGGAGCAGTTTGTAATGAATATTTCTGCAGGAGGTTTGGTTGTCAATGACACTGCATTACATCTTGCAGTAAATACTCTGCCTTTTGGGGGAGTTGGGGAGAGTGGAGTCGGTGCATACCATGGAAAATTCTCATTTGATGCATTTAGCCACAAAAAAGCAGTTCTTTATCGGAGTTTTCTCGGCGATGCACCAGTAAGGTACCCACCATACACAAATATAAAGATGAGATTGTTGAAGGCACTAGTTGGTGGTGGCTTACTTGGTATAATTCGTGCCCTGTTTGGATTGTCCTAG 1479 0.4395 MSSSTDADEKKKESFNAEAASLLVNNLRATFASGTTRSYEWRASQLKALIKLCDAHEQQIIDALYSDLAKPPLETVAYEIAMFKNSCKAALKELKRWMTSEKVKTSIATFPSTAEIVSEPLGVVLVISAWNYPFLLSLEPVIGAIAAGNALVLKPSEIAPATSSLLAKLLGEYLDNSCTRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSNIDLKVATRRIIAGKWGCNNGQACVSPDYIITTKDYAPKLVDSLKAELEKFYGKNPLESKDLSRIVNSNHFGRLTKFLDDEKVSGKIVFGGEKDESKLRISPTILLDIPRNSLIMREEIFGPLLPIITVDKLEESFDVINSGTKPLAAYLFTTNNKLKEQFVMNISAGGLVVNDTALHLAVNTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFLGDAPVRYPPYTNIKMRLLKALVGGGLLGIIRALFGLS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2479 492 PANTHER ALDEHYDE DEHYDROGENASE 7 492 - -
Amo18g2479 492 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 225 232 IPR029510 GO:0016491
Amo18g2479 492 PANTHER ALDEHYDE DEHYDROGENASE 7 492 IPR012394 GO:0006081
Amo18g2479 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 447 IPR016162 GO:0016491
Amo18g2479 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 229 429 IPR016163 GO:0016620
Amo18g2479 492 SUPERFAMILY ALDH-like 23 465 IPR016161 GO:0016491
Amo18g2479 492 Pfam Aldehyde dehydrogenase family 17 449 IPR015590 GO:0016491
Amo18g2479 492 PIRSF ALDH 6 481 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2479 Amo-Chr18 95721365 95728300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2479 80 492 Aldehyde Dehydrogenase Gene Family AT1G44170 74.092 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2479 K00128 - gmx:100778722 822.387