Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2465 ATGGAGAAGGAGAAAGGGACTATCACTACGACCAACAATAACAACAAGATAGAGAGGGGGCACCAGATGTACCGTGAGGGGCGTTACAGGGAAGCATTAGGGTTTTACACGGACGCGATCGCCCTCGCTAAAACCAAACCCCACAAGATCGCTCTCCACAGCAATCGCGCTGCTTGTTACCTCAAACTTCACCATTTCAAAAAGGCAGCAGAAGAGTGTACCTCAGTGCTTGAGCTTGATCAAAACCACAGTGGGGCATTGATGCTGAGGGCTCAAACACTAGTCACCTTGAAGGAGTACCATTCAGCGCTTTTTGATGTCAATAGACTTTTAGAGTTGAACCCATCCTCAGAAGTATATCAAAATCTTCACGCTCGCTTGAAGACACAGTTGACACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTGAAGAGCAGGAAGAAGAATCAGAAGACAGTCCTGAGGTCATACTAGGAGGAGAGAATAATGAGGAATCAATGGGAGGTAAGTACTTGGCAACTTCGGATATTAGAATTGATCAGAAGGTTGAACTCCGGAAAGATATCGTAAGTGCTGAATGTGCTTCTCAAGATACAAAATCCAAGTTCCCATCCAAAGATGGAAGAGACCAGAACAGTGAGGCTGAAAAGTCAAAAGCAGAGGCTGTAGCACCTAAAGCACTGAACAGGGAATCAACCGAGCAACAAACGAAAGGGTGGCAAATGATTCCAAAACCGAAAGGGCATTCAGCTCTGGACTATGCACGATGGGACAGTGTTGAAGATGATTCTAGTGAAGACGATGACGACAATGAAGATGAAGAATCTTTGCCCCAGTACCGGTTCCGCGTAAAAACGGTTGGGGTACGGCCTGTCAAGTGA 882 0.4615 MEKEKGTITTTNNNNKIERGHQMYREGRYREALGFYTDAIALAKTKPHKIALHSNRAACYLKLHHFKKAAEECTSVLELDQNHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLHARLKTQLTLAPIPESEEEFEEQEEESEDSPEVILGGENNEESMGGKYLATSDIRIDQKVELRKDIVSAECASQDTKSKFPSKDGRDQNSEAEKSKAEAVAPKALNRESTEQQTKGWQMIPKPKGHSALDYARWDSVEDDSSEDDDDNEDEESLPQYRFRVKTVGVRPVK* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2465 293 MobiDBLite consensus disorder prediction 138 155 - -
Amo18g2465 293 MobiDBLite consensus disorder prediction 138 171 - -
Amo18g2465 293 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 12 293 - -
Amo18g2465 293 MobiDBLite consensus disorder prediction 200 224 - -
Amo18g2465 293 SMART tpr_5 84 117 IPR019734 GO:0005515
Amo18g2465 293 SMART tpr_5 50 83 IPR019734 GO:0005515
Amo18g2465 293 Gene3D Tetratricopeptide repeat domain 9 133 IPR011990 GO:0005515
Amo18g2465 293 SUPERFAMILY TPR-like 17 130 IPR011990 GO:0005515
Amo18g2465 293 MobiDBLite consensus disorder prediction 195 282 - -
Amo18g2465 293 MobiDBLite consensus disorder prediction 260 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2465 Amo-Chr18 92463163 92467274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2465 14 131 Calmodulin-binding Proteins AT3G25230 32.308 1.83e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2465 - - aip:107613864 503.442