Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2443 ATGGGAAAGCTATACAAGGGATTCTATGGGAGATGCTTAACTACAGTTACAGAAGTACCGCGAGAATTGATTGAAGCAGTACAAGAACCACTCCCCTTCTCGAGAGGATCACGACAAGAGTGTTTGGAAGTGCAGAAGGGGAAGGCCTTCTATAACTTCCAGTTCAACACAAGACTTTATGCATTTGGACGGAGGACCGGCAGCAATTTCAATGTTGTGATACAGAAGCGCTTGTTCATGAGCAAGGAAGGTAAAATTGCCATGGTAGTGGAAACTGTAACCGATGATATCAGAGTGTCTGAAGTTCATGCATTAAAGGTTACGACACTCATGTTTATAGAGACTACACGTGCTAGAATAGAGATGCTTGCACTTAGAGCACCTCTCGGACAGAACACGGTCATTCTTCGAGGCCCAAAGAACTCTAGGGAAGCTGTGAAACAATTTGGTCCTGCCCTTGGTGTTCCTCAAAGTCATACCAAGCCATATGTACGATCTAAGGGAAGCAAGTTTGAGAAGCATGTTGAGAAATCAGAGTTTTAA 543 0.4383 MGKLYKGFYGRCLTTVTEVPRELIEAVQEPLPFSRGSRQECLEVQKGKAFYNFQFNTRLYAFGRRTGSNFNVVIQKRLFMSKEGKIAMVVETVTDDIRVSEVHALKVTTLMFIETTRARIEMLALRAPLGQNTVILRGPKNSREAVKQFGPALGVPQSHTKPYVRSKGSKFEKHVEKSEF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2443 180 Pfam Ribosomal protein 60S L18 and 50S L18e 82 174 IPR021131 -
Amo18g2443 180 PANTHER 60S RIBOSOMAL PROTEIN L18 82 174 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo18g2443 180 MobiDBLite consensus disorder prediction 152 180 - -
Amo18g2443 180 Gene3D - 51 179 - -
Amo18g2443 180 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 57 83 - -
Amo18g2443 180 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 82 174 - -
Amo18g2443 180 PANTHER 60S RIBOSOMAL PROTEIN L18 57 83 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo18g2443 180 MobiDBLite consensus disorder prediction 165 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2443 Amo-Chr18 89404266 89406006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2443 79 173 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 66.981 3.62e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2443 K02883 - csv:101209626 160.229