Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2400 ATGCGAGCATCGAAATGGATCCATATAAGGCTCTTAGGTAGAGCGATTAAGACGAAGAAACTGAATCCTCGATACATCGGTCCAGGAAGTACCACGAGTCAATTGAAGAGGAGGAACAAGACTCACACCCTCTGTGTGAGGTGCGGCCACCGCAGCTTTCACCTCCAAAAGAGTCGCTGCTCCGCCTGCGATAATTGGAGCGTGAAGGCCATCCGCAGAAAGACCACCGGCACTGGCATGATGAGGTACCTCCGTCACGTGCCTTGCCGATTCAAGAGCGGCTTCAGAGAAGGTACTGAAGCTGCACCAAGGAAGAAGGGAGCAGCTGCATCTGGAGAGACTGTACATGGGAATCATCATCATCTTGGTCAAGCTCTTCTGGAAGAAACCAGAGTAGCGTTACAAGTATGA 411 0.5134 MRASKWIHIRLLGRAIKTKKLNPRYIGPGSTTSQLKRRNKTHTLCVRCGHRSFHLQKSRCSACDNWSVKAIRRKTTGTGMMRYLRHVPCRFKSGFREGTEAAPRKKGAAASGETVHGNHHHLGQALLEETRVALQV* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2400 136 Gene3D - 29 104 IPR011331 GO:0003735|GO:0005840|GO:0006412
Amo18g2400 136 MobiDBLite consensus disorder prediction 98 118 - -
Amo18g2400 136 PANTHER 60S RIBOSOMAL PROTEIN L37 30 111 - -
Amo18g2400 136 PANTHER 60S RIBOSOMAL PROTEIN L37-1-RELATED 30 111 - -
Amo18g2400 136 Pfam Ribosomal protein L37e 31 64 IPR001569 GO:0003735|GO:0005840|GO:0006412
Amo18g2400 136 SUPERFAMILY Zn-binding ribosomal proteins 31 71 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2400 Amo-Chr18 83256383 83259594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2400 31 111 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 73.333 1.38e-39 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2400 K02922 - vvi:100247371 145.591