Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2294 ATGTTACCGGAGAACTTCAAAGAACAGCATGCTTTGTCTGTGAGAAGCATCCAGTGGAGCTATGCAATATTCTGGTTTACTTCATCTACCCAACCCATGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAGACAGGTCAAGGAGTGGAACTCAATTCTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCTCAAAGCTGTAGAAGCCAGCCCTCAAACCAAAAGGCCTTCGGCAGCACTGTCTCCGAAGGATCTCACAGATACAGAATGGCTATAA 315 0.4635 MLPENFKEQHALSVRSIQWSYAIFWFTSSTQPMVLSWGEGYYNGDIKTRKTGQGVELNSDQIGLQRSEQLRELYKSLKAVEASPQTKRPSAALSPKDLTDTEWL* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2294 104 MobiDBLite consensus disorder prediction 80 104 - -
Amo18g2294 104 PANTHER TRANSCRIPTION FACTOR EGL1 5 103 - -
Amo18g2294 104 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 13 103 IPR025610 -
Amo18g2294 104 PANTHER TRANSCRIPTION FACTOR TT8 5 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2294 Amo-Chr18 72782963 72783641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2294 2 103 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 63.889 4.55e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2294 - - ahf:112732736 190.66