Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2289 ATGAGTAAATATTCTCTTGATAAGCAAGCTTTTGAGAGTTCCCGTTTTGCCACTCCATACTTGTGTTTTGCCAAAGCAGCAGGTGTTAGAGGAACTATCGAAAGGTATAAGAAAGCAAGTGCTGCTTCCTCAAACACAGAATCTGTATCTGAAGCTAATACACAGTTTTATCAGCAAGAATCATCCAAATTAAGAAGACAGATTCGTGATATTCAAAATCTAAATAGGCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGCCTCAAGGAACTAAAGAACCTTGAGAGTAGATTGGAGAAAGGTTTAAGCAGAGTTCGATCTAGAAAGAAGGATATGATGTGA 342 0.386 MSKYSLDKQAFESSRFATPYLCFAKAAGVRGTIERYKKASAASSNTESVSEANTQFYQQESSKLRRQIRDIQNLNRHILGEALSSLSLKELKNLESRLEKGLSRVRSRKKDMM* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2289 113 Coils Coil 57 77 - -
Amo18g2289 113 PANTHER SERUM RESPONSE FACTOR HOMOLOG 27 112 - -
Amo18g2289 113 Coils Coil 88 108 - -
Amo18g2289 113 ProSiteProfiles K-box domain profile. 54 113 IPR002487 GO:0003700|GO:0005634|GO:0006355
Amo18g2289 113 PANTHER MADS-BOX TRANSCRIPTION FACTOR ARLEQUIN 27 112 - -
Amo18g2289 113 Pfam K-box region 52 113 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2289 Amo-Chr18 72413975 72415512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2289 29 113 MADS-box Gene Family AT2G42830 75.294 4.93e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2289 K09264 - ahf:112748212 150.599