Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2287 ATGGTGGATATGGATGTTTTTGGAGCTGGGGGTGATCTTGGAGCAGCTCCTAGCACACAGGATCTTAGGCAATTAGGGGGTGCTTCCTCAGAAGGAGCAGTTTTTGATGCATCACAATATGCGTTCTTTGGTAAAGATGCTGTCCAGGAAGTTGAATTGGGAGGGTTAGAAGATGATGATTATTTGCCTCCAGTTGAATCTAAAGAGGATTTCTTTTTCAATAGAGATGAGGCTGAGGATGTAAGATCGCTTTCCGACATTGATGATCTCACCACTACTTTTATGAAGTTGAACAAGAATGTGAGTGGACCAAGAAGTCCAGGAGTTATTGGCGATCGAGGATCACGAGAAAATTCGACTTCTGAATGGCCACAAAGGGATGATATGAACTGGCCTGACCACATGAATGCTTATGATAGTGAAGGTTCTCTGGATGGCAAAAGATGGTCATCGCATCCCCATTCTTCTCTCGCCCATTTAAATGAACCTAAGCCCTTGTACAGAACGTCTTCCTATCCTGATCAGCAAAGGCAGCCACAACAATACCAACTCCAGCATCGCTCTAGTGAACCCGTTGCTAACTGGCTTGATCAACTTTTTTATGAAACTGAAACATCTCAGGATGGCAAAAGATGGTCATCACAGCCACATTCCTCCTTCCCTCAGCTACAAGAATCAAAGCCTTTGTACAGAACATCTTCATATCCTGAAAAGCAGCCGGAGCTTACTCGTTATTCCAGTGAACCAATTTTGGTACCAAAGTCTTCATTTACTTCTTTTCCTCCTCCTGGTGGCAGGTCTCAGCAGACTTCTCCTAGTCATAGTGCAAGCCACTTGAACATTTCATATCATGCTGGAGGAGCTCAGATGGGACTTTCATCTCAAAATCTATCTCATCTTTCTAATTCTGCACTACAGTTGAGTGGATTAAACCATGGGTCTCATTTTGGTGGAAACATGCGCCAGTTTCCTACTGGTTCTGCTCTTCAGCGAATTCAGAATCAACTGGTCAACCAGGCAGCGTTATATCCTGGAGATCATTCAAACCTTCTTAGTAATATGTTGCAGCAGCAATTACACCTTCACAATGGATCAATATCTCCACACTTAATGACTCAATTACAGCAACAGCAACACAGATTGCATCATCCTGTTCAGCAATCTGCAAGCTATTTATCAGGTTTCAAGTCCCATTTATTTAACCCCCACCTTTCTTCTAGCTCGTCTCTTGGAAAATATGAACATATGCTCGGTCTGGGTGATGTTAGAGATCATAGGCCAAAATCAAATCAAAAAGGAAAACATAGTCTCCGTTTCTCCCAACAGAATTCTGATGCCAGTAGCCAGAAGAGTGAAAGTGGTTCATTACAGTTTAGGTCCAAATATATGACAAGTGATGAAATTGAGAGTATTCTTAGAATGCAGCATGCTGTGACTCATAGTAATGACCCGTATGTGGATGACTATTATCACCAAGCTTGTCTTGCAAAAAAGGCTCCTGTGGCGAAGTCAAAAAATTTGTTTTGCCCAACCCAGATAAGGGAAGTTCCTGCTCGATCTCGTTCTAATTCTGATCAGCATGCTTTTCTCCAGGTTGATGCCATGGGTAGGATTACATTCTCATCTATTCGACGCCCTCGGCCTCTTTTGGAGGTTGATCCTCCAAACTCTTCTGTTACCAGTAGCTCTGAGCAAGGCATTTCAGAAAAGCCTCTTGAACAGGAGCCTATGTTTGCAGCTAGAGTCACAATTGAGGATGGTCTGTGTTTGCTCCTTGATGTAGATGATATTGATCGTTTCCTAAAGTGTAATCAGCTACAAGATGGGGGAAGCCAATTAAGACGAAGACGACAGGTCCTGTTGGAAGGATTAGCAACTTCACTTCAGCTTGTTGACCCACTGGGGAAAAATGGACATAAAGTTGGACTTGCTGCTAAGGATGATGTAGTTTTCTTGAGATTAGTATCTATTGCCAAGGGACGTAAGCTCCTTGCAAAGTATCTTCGGTTGCTTCTTCCTGGTAGTGAACTTATGAGGATAGTCTCTATGGCAATCTTCCGTCATCTAAGATTCTTATTTGGTGGTCTCCCTGCAGATCCAGCATCTTTGGAGACTACAAGTAACCTTGCCAAAATTGTCTGCCAATGTGTTCAAGGAATGGATCTTGGTGCTCTCAGTGCTTGTCTTGCGGCAGTTGTTTGTTCTGCGGAGCAGCCTCCTCTTCGTCCTCTTGGAAGCTCTGCTGGAGATGGGGCTTCTCTTATTTTAGTATCTGTTCTTGAGAGGGCTACTGAACTTCTAACTGATCATCATGCTGCATGCAACTACAATATGGGTAATCGTTCGTTTTGGCAGGCCTCATTTGATGAATTCTTTGGCCTTCTGACGAAGTATTGCATGAATAAATACCAAAGTATCATGCAATCCCTGCTTATACAAAATCCAGCAAATGTCGATGACATTGGATCGGATGCAGCTAAAGCAATTAGTAAGGAAATGCCTGTTGAACTCCTTCGTGCAAGTCTCCCTCACACTGATGACCGCCAGCGGAAGTTATTACTGGATTTCGCACAGCGCTCGGTTCCTGTGGTTGGATTTAACAATAATGCAGGCAGTAGCGGCGGCAGTCATGTGAACTCAGAGACAGTGCTAAGTTGA 2658 0.4353 MVDMDVFGAGGDLGAAPSTQDLRQLGGASSEGAVFDASQYAFFGKDAVQEVELGGLEDDDYLPPVESKEDFFFNRDEAEDVRSLSDIDDLTTTFMKLNKNVSGPRSPGVIGDRGSRENSTSEWPQRDDMNWPDHMNAYDSEGSLDGKRWSSHPHSSLAHLNEPKPLYRTSSYPDQQRQPQQYQLQHRSSEPVANWLDQLFYETETSQDGKRWSSQPHSSFPQLQESKPLYRTSSYPEKQPELTRYSSEPILVPKSSFTSFPPPGGRSQQTSPSHSASHLNISYHAGGAQMGLSSQNLSHLSNSALQLSGLNHGSHFGGNMRQFPTGSALQRIQNQLVNQAALYPGDHSNLLSNMLQQQLHLHNGSISPHLMTQLQQQQHRLHHPVQQSASYLSGFKSHLFNPHLSSSSSLGKYEHMLGLGDVRDHRPKSNQKGKHSLRFSQQNSDASSQKSESGSLQFRSKYMTSDEIESILRMQHAVTHSNDPYVDDYYHQACLAKKAPVAKSKNLFCPTQIREVPARSRSNSDQHAFLQVDAMGRITFSSIRRPRPLLEVDPPNSSVTSSSEQGISEKPLEQEPMFAARVTIEDGLCLLLDVDDIDRFLKCNQLQDGGSQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDVVFLRLVSIAKGRKLLAKYLRLLLPGSELMRIVSMAIFRHLRFLFGGLPADPASLETTSNLAKIVCQCVQGMDLGALSACLAAVVCSAEQPPLRPLGSSAGDGASLILVSVLERATELLTDHHAACNYNMGNRSFWQASFDEFFGLLTKYCMNKYQSIMQSLLIQNPANVDDIGSDAAKAISKEMPVELLRASLPHTDDRQRKLLLDFAQRSVPVVGFNNNAGSSGGSHVNSETVLS* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2287 885 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 193 863 IPR039900 GO:0000290
Amo18g2287 885 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 18 192 IPR039900 GO:0000290
Amo18g2287 885 MobiDBLite consensus disorder prediction 98 188 - -
Amo18g2287 885 MobiDBLite consensus disorder prediction 207 241 - -
Amo18g2287 885 MobiDBLite consensus disorder prediction 554 569 - -
Amo18g2287 885 MobiDBLite consensus disorder prediction 168 188 - -
Amo18g2287 885 MobiDBLite consensus disorder prediction 207 279 - -
Amo18g2287 885 PANTHER PROTEIN PAT1 HOMOLOG 193 863 - -
Amo18g2287 885 PANTHER PROTEIN PAT1 HOMOLOG 18 192 - -
Amo18g2287 885 MobiDBLite consensus disorder prediction 119 134 - -
Amo18g2287 885 MobiDBLite consensus disorder prediction 434 459 - -
Amo18g2287 885 MobiDBLite consensus disorder prediction 549 569 - -
Amo18g2287 885 MobiDBLite consensus disorder prediction 421 459 - -
Amo18g2287 885 MobiDBLite consensus disorder prediction 249 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2287 Amo-Chr18 71944827 71953033 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2287 K12617 - gmx:100787648 1382.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2287 18 71944827 71953033 Amo18g2287 18 71944827 71953033 ECH