LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo18g2275	ATGGTGAAATCATCACAATATGAAAGATTCTCAAAGGATTTTGTAATGGAAGGGGTAGCAGCAATCATGTTGAAGAGTGCCGCGGCACCAATCAAGAGAGTGAAACTTCTATTGCAAAACCAAGTTGAAATGATTAAAAGAGGGCAACTCAAGAAACCATACATGGGTGTGTATGATGGATTTAAGAGGGTGTTTGTAGAAGAGGGTGTCATTGCCTTCTGGAGAGGTAACCAGGCCAATGTCATCCGATACTTCCCTACACAGGTTACTTCAAAAGCATTTTTGGGCAATCCAAATAGAGAGACGGGTACATTAAGTGGTTTGCTGGAAATGTGGCTTCAGGAAGTGCCATGGGAGCAACTACTTCACTGCTTCTTTATCATTTAG	387	0.4186	MVKSSQYERFSKDFVMEGVAAIMLKSAAAPIKRVKLLLQNQVEMIKRGQLKKPYMGVYDGFKRVFVEEGVIAFWRGNQANVIRYFPTQVTSKAFLGNPNRETGTLSGLLEMWLQEVPWEQLLHCFFII*	129

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo18g2275	128	Pfam	Mitochondrial carrier protein	9	90	IPR018108	-
	Amo18g2275	128	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	12	101	IPR018108	-
	Amo18g2275	128	PANTHER	ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED	5	96	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Amo18g2275	128	PRINTS	Adenine nucleotide translocator signature	54	75	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Amo18g2275	128	PRINTS	Adenine nucleotide translocator signature	10	22	IPR002113	GO:0005471\|GO:0005743\|GO:0140021\|GO:1990544
	Amo18g2275	128	PANTHER	ADP,ATP CARRIER PROTEIN ER-ANT1	5	96	-	-
	Amo18g2275	128	SUPERFAMILY	Mitochondrial carrier	8	94	IPR023395	-
	Amo18g2275	128	Gene3D	Mitochondrial carrier domain	3	115	IPR023395	-
	Amo18g2275	128	PRINTS	Mitochondrial carrier protein signature	26	40	IPR002067	GO:0055085
	Amo18g2275	128	PRINTS	Mitochondrial carrier protein signature	76	96	IPR002067	GO:0055085
	Amo18g2275	128	PRINTS	Mitochondrial carrier protein signature	13	26	IPR002067	GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo18g2275	Amo-Chr18	71125308	71126424	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo18g2275	8	96	Antiporters	AT5G17400	69.663	1.89e-32	114

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo18g2275	K05863		-	aip:110270890	214.542