Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2266 ATGGAATCTAGCTCCGGCAGCAATCACCGCGATTTGGCTGAGGAAAGCGAGAGAAGCATWGCCGCGGTTCATGATCAACCAGAGCCCRGCACCACCGGCGGCGGTGACGACGARGATCCACTCGAGAGAAGCTCCGAGGTTTTGGCGAAGGGATTGTCATCGATGCTCTCGTCCGTCATCAAGGACTTCGATTTCAGAGCACGAGAAACTCTTGGCAGCCAGGACCAGCTCTCCTCCGCCATCGATCGTCTCACTCGAGAACTTGATCAATTACTTGAAGATGCACCTTTACCGTTCATAATGCAACATGCTGCTAAGATTTCTAGTATTAGGAAGAGAGTTTCATCACTGAATTTACTTCTAAAATCCATACAAGGGCGGATTGATAACATAGACCGCATAATGTCAATTGGCACCACTCATGAGAAGACAACCCCTGAAGGTTCTGAGTGA 453 0.4901 MESSSGSNHRDLAEESERSIAAVHDQPEPXTTGGGDDEDPLERSSEVLAKGLSSMLSSVIKDFDFRARETLGSQDQLSSAIDRLTRELDQLLEDAPLPFIMQHAAKISSIRKRVSSLNLLLKSIQGRIDNIDRIMSIGTTHEKTTPEGSE* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2266 150 Coils Coil 74 94 - -
Amo18g2266 150 MobiDBLite consensus disorder prediction 7 22 - -
Amo18g2266 150 Pfam Snapin/Pallidin 46 131 IPR028119 -
Amo18g2266 150 PANTHER SNARE-ASSOCIATED PROTEIN SNAPIN 3 149 IPR017246 GO:0006886|GO:0031083
Amo18g2266 150 MobiDBLite consensus disorder prediction 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2266 Amo-Chr18 70785398 70790222 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2266 - - aprc:113856286 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2266 18 70785398 70790222 Amo18g2266 18 70785398 70790222 ECH