Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2256 CTAGGAGGGAGAAGGCACCGTCATGCATCCTCGTTGCCGTCGCTGGAGATCTGGTCGTCGCCGCCGATCGTCCTTGAGCCGCGTCGGAAACAGAACTGCGAACGGAAGGGAGCGCGAACCATAGCCACGAACAGAGAAGAAAGAGCGCGCGCGGAGGAGGTGAAGCCGTCGTTGTCACCGTCGCGTGTGGAGTCGCCGCCGCGCCTGGTCTCCGTTGCTGCTGAGCTTCGACCGCCGCCGTTCCTGCCGCCGTCAAGCCTCGGAATTCCATTTATTTTCAATACATGGATTGTAAGGCATCTTACACAAGAGGACTATGCGGATAAGATGTCTCATAGGAAGTTCGATCACCCAAGACACGATTCTCTTGGCTTTCTTCCAAGGATGCCAGCTTCTTGTTATCATGGAAAAGGTTATCTAGCTCCATTTCCTGCTAATAATCCACTACTAGGATCCTTGCCAAAGGCTGGAGGGTTTCCTCCTCTTAGTGCACATGGGCCTTTTCAACCTACTCCAACACCTGTGCCAACACCCCTGGCTGGTTGGATGTCAAATCCTACCACTGTAGCACATGTTGCAGTTTCTGGAAGAGCCACTATAGGTCTTGGTACTGCTACAGGTCTTGGTGCACCATCAATCACTGACATTGAAGCAGTAGAGGAAATTAACTTTTCAGTTTCTGAAGTGAAGAGCAACTACAAGGATAATGGCCTGAATGACTCAAGTAAAATTGCTGCATTTGATTTTGATAGGTGTCTTGCAAAAACTGCTGTGAATAAGTATGCTTGA 789 0.5019 LGGRRHRHASSLPSLEIWSSPPIVLEPRRKQNCERKGARTIATNREERARAEEVKPSLSPSRVESPPRLVSVAAELRPPPFLPPSSLGIPFIFNTWIVRHLTQEDYADKMSHRKFDHPRHDSLGFLPRMPASCYHGKGYLAPFPANNPLLGSLPKAGGFPPLSAHGPFQPTPTPVPTPLAGWMSNPTTVAHVAVSGRATIGLGTATGLGAPSITDIEAVEEINFSVSEVKSNYKDNGLNDSSKIAAFDFDRCLAKTAVNKYA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2256 262 MobiDBLite consensus disorder prediction 30 64 - -
Amo18g2256 262 MobiDBLite consensus disorder prediction 30 57 - -
Amo18g2256 262 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 131 206 IPR027728 GO:0006355
Amo18g2256 262 Gene3D Ribosomal protein L3, domain 3 110 147 IPR044892 -
Amo18g2256 262 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 131 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2256 Amo-Chr18 70389417 70392386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2256 110 148 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 61.538 3.47e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2256 - - ccaj:109807219 114.005