Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2242 ATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAAGCAAGACATGTAGGCGGATCTACTCATCAAGTTTCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCTATTCGTTGGTTATTAGGGGCATCCCGAAAACATCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGTAAAAGGGAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCGTTTGCACATTTTTGTTAA 330 0.403 MKKIQQKTETNPLSVLRQAIRGVTPDIAVKARHVGGSTHQVSIEIGSTQGKALAIRWLLGASRKHPGRNMAFKLSSELVDAVKGSGDAIRKKEETHRMAEANRAFAHFC* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2242 109 Pfam Ribosomal protein S7p/S5e 1 103 IPR023798 -
Amo18g2242 109 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 109 IPR000235 GO:0006412
Amo18g2242 109 TIGRFAM rpsG_bact: ribosomal protein uS7 1 108 IPR005717 GO:0003735|GO:0006412|GO:0015935
Amo18g2242 109 SUPERFAMILY Ribosomal protein S7 1 103 IPR036823 -
Amo18g2242 109 Gene3D Ribosomal protein S7 domain 1 109 IPR036823 -
Amo18g2242 109 PANTHER 30S RIBOSOMAL PROTEIN S7, CHLOROPLASTIC 1 108 - -
Amo18g2242 109 PANTHER RIBOSOMAL PROTEIN S7 1 108 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2242 Amo-Chr18 69308534 69308863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2242 1 103 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 31.481 3.00e-06 42.4