Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2206 ATGATCCTCTCAAGCCAACATGATGCAGAGCCAGGGGAGTCCACTCAAGGGATGGGTGGTACTACGGACCACGTTGATGTGGAACAGACGTTGCAAAACCAGCAGCAGCAGATACCTGAAACGAGGGGCGGGGATATGAAAAGGATTGAGGTCCCCATATCCCGGGGAAAGGCGGCGGTGCAGTGGGATCCGGCGGCGACACTGATCGGCGGGGGGGAGACGGTGAATGCACAAGAGGAGGACAGAATGGATCTCCATGTACCGGATTCTGTTAGTGGTACCAAGGACAATGGGGATGCCGTTGTTACAAGATTGGAGGGGATGAATGAGGGCGATTCGGAAAGGACGGTTACGCAGGCGTGTGCTAGAGACTATGGGGTGTACCATGGGATGCCGCTGGGCTGCCAGGTGGGGTGGTGTGTGGGGAGTGCTTTGGGCTTGTCTTCAGCTGGCCCAATAGCTATGCAGGGGAGAATTGGGCTGGAGGGGGAAAATTGTGCGTGCAGGGTGAGTGGGGAAAAGGCTGGGCGGGAGATTGGGACAGAGGTAGCAATGGGCCAGAGTTGGGATCGGGTTACAAGGGATCGTGGCCCGGTTCCCCTTAGTGGCACGGGCGGGTCTGGGGATCCGACACGGAGCCAGCCGTCTCGCGTGTGGATTGCAACGGCGCCCCTGGATGGTGGGCGAGTTTGGCCAGGATACCCAGAAGAGCGTGCGGCCGATCTGGGAGGTCGCGTCATGGTGAGTGGGTCGCAGTGGGGGATGTCCGCCAGAGGGCCAGGCCAGGGGAAGGATCAGGAAGCCCAGGAAGGGGAACCTCCAGGCTTGATTGATGATAGGCAACGCGACACAGGGAGCATGATACCGCAGACAGGGGATGTAGGGACCGTGGACGAGCATGGCAACCCAGAGGATGACACTCAGGATGTGGATGCCGGTGTTGATCCTGGGCGGGTAGGATTCGGGAAGAAAACGGCAACATGTGAGCAGGCAGCAGGGGATGAGTGCAAGGGTACACGGGAAGAGCAGGTGCAAGAAAATAAAGCAACCTGGGCACTGGCAGTGGAATCGGGTGCGCTGTCCAGAAAAAACTTGCGGCCCACTCAAGTCTCCACACTATATAACGGCACAAACTCCCTCCCTGGATTCTGCACCAAACGAAAGAGCACATATTATAACCCCTTCCATTTTCCATTATTCTTGAAAAAGCTTCATCAGATCTCTCGAGCACATATTATAACCCCTGGTCTCTCTCTCCCCCTACATAATATTTTCTTATATATAAAGTCAGTGTTACCAATTGTCTCTGGACAACCAAAATACATGATCGGTTCGGAAATCGAGATCCCAACCCACTTCGATCCATTCACTGAGGCCAAAGAATTGGGTGGCGTAGGGGCAAAGGAATATATCCATATCCGCATCCAGCAGAGGAATGGGAAGAAGAAACTGACCACAGTGCAAGGCTTGAAAGAATTGGGCTTAGAGAAGATACTCAAAGATCTCAAGAAAGAGTTATGTTGCAATGGCAATGTGGTTCAAGACAAGGAGCATGGCAAGATAATCCAGCTTCAAGGTGACCATCGCAAGAACGTTTCCCAATTGTTGGTTCAGGCTGGTCTTGTTATGAAGGATCAGATCAAGATTCATGGTTTTTGA 1659 0.5359 MILSSQHDAEPGESTQGMGGTTDHVDVEQTLQNQQQQIPETRGGDMKRIEVPISRGKAAVQWDPAATLIGGGETVNAQEEDRMDLHVPDSVSGTKDNGDAVVTRLEGMNEGDSERTVTQACARDYGVYHGMPLGCQVGWCVGSALGLSSAGPIAMQGRIGLEGENCACRVSGEKAGREIGTEVAMGQSWDRVTRDRGPVPLSGTGGSGDPTRSQPSRVWIATAPLDGGRVWPGYPEERAADLGGRVMVSGSQWGMSARGPGQGKDQEAQEGEPPGLIDDRQRDTGSMIPQTGDVGTVDEHGNPEDDTQDVDAGVDPGRVGFGKKTATCEQAAGDECKGTREEQVQENKATWALAVESGALSRKNLRPTQVSTLYNGTNSLPGFCTKRKSTYYNPFHFPLFLKKLHQISRAHIITPGLSLPLHNIFLYIKSVLPIVSGQPKYMIGSEIEIPTHFDPFTEAKELGGVGAKEYIHIRIQQRNGKKKLTTVQGLKELGLEKILKDLKKELCCNGNVVQDKEHGKIIQLQGDHRKNVSQLLVQAGLVMKDQIKIHGF* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2206 552 MobiDBLite consensus disorder prediction 191 217 - -
Amo18g2206 552 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 447 552 IPR005874 GO:0003743
Amo18g2206 552 Pfam Translation initiation factor SUI1 468 540 IPR001950 GO:0003743|GO:0006413
Amo18g2206 552 MobiDBLite consensus disorder prediction 250 314 - -
Amo18g2206 552 SUPERFAMILY eIF1-like 441 552 IPR036877 GO:0003743|GO:0006413
Amo18g2206 552 ProSiteProfiles Translation initiation factor SUI1 family profile. 471 540 IPR001950 GO:0003743|GO:0006413
Amo18g2206 552 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 442 552 - -
Amo18g2206 552 MobiDBLite consensus disorder prediction 1 23 - -
Amo18g2206 552 Gene3D - 437 552 - -
Amo18g2206 552 CDD eIF1_SUI1 469 551 IPR005874 GO:0003743
Amo18g2206 552 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 442 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2206 Amo-Chr18 67123480 67130970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2206 442 552 Eukaryotic Initiation Factors Gene Family AT5G54940 72.321 2.73e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2206 K03113 - ini:109190435 164.851