Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2205 AGCTTGCTCCTAGCTCTCTACTTCACTTGCATAGGTGGAGGAAGTGCCAAGGCAAAAGAGAATGCAGCAATAATGAATAGTTTCATTGAAGAACAAGAGGGGCATCTAGAGCTTCCATTGTTTGATCTATCTGGTTTAGCTAATGCTACTGGTAACTTTTCAATAAAAAACAAGTTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGATTATTGAAAAATGGGCAAGAAATTTCTATTAAAAGACTTTGTAGAGGTTCTGTACAAGGGCTTAAAGAATTCAAAAATGAAATTGCACCGATTGTCAAACTTCAACATCGTAATCTTGTGAAACTTCATAGATATTGCATTCACAATGAAGAGAAAATGCTTGTATATGAATACATGCCCAAAAAAAGTTTGGATTTCTTTATATTTGATCAAACACGGAGAAAGTTCTTGGATTGGTTGAAGTGTTTTCGTATGATTTTTGGGATTGCAAAGGGTCTCCTTTATCTTCATCGAGATTCAAGACTTAGAATCATTCACAGAGATTTTAAAGCAAGTAATGTCTTACTTGATAGTGAAATGAATCCTAAAATCTCAGATTTTGGTTTGGCTAGAATTTTAGGAGGTGACCAAATTGCAGCAACAACGCGACGAGTGGTTGGAACATACGGATATATGGCACCTGAATACGCAATAGATGGAAACTTGTCAGTAAAATCTGATGTCTTTAGCTTTGGCGTTTTGTTACTGGAGATACTATCCGAAAAGAAAAACAAAGGAAATCATTGGGAAAATGAAAGCACAGATCTTATTGGCTATGCATGGGATTTGTGGACTAAAGAAAGGCCTCTAGAAACTGTTGATGATATTCTAATAGAGTCTTGTAACCTCTCTCAAGTATTGAGGTGCATTCATATTAGTCTTCTCTGTTTGGAGCAACATCCATATGCTAGACCAGACATGTCATCAGTGATTATGATGTTTGGAAGTGAAATTGCCTTGCCTAAGCCAAAACGACCTGCTCTATTTATTGGAGAATATGCATATCAATATGATCCTGCCAACGAATTCAGTATCGAAGTCCTAGAATCTAGATGA 1086 0.3665 SLLLALYFTCIGGGSAKAKENAAIMNSFIEEQEGHLELPLFDLSGLANATGNFSIKNKFGEGGFGPVYKGLLKNGQEISIKRLCRGSVQGLKEFKNEIAPIVKLQHRNLVKLHRYCIHNEEKMLVYEYMPKKSLDFFIFDQTRRKFLDWLKCFRMIFGIAKGLLYLHRDSRLRIIHRDFKASNVLLDSEMNPKISDFGLARILGGDQIAATTRRVVGTYGYMAPEYAIDGNLSVKSDVFSFGVLLLEILSEKKNKGNHWENESTDLIGYAWDLWTKERPLETVDDILIESCNLSQVLRCIHISLLCLEQHPYARPDMSSVIMMFGSEIALPKPKRPALFIGEYAYQYDPANEFSIEVLESR* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2205 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Amo18g2205 361 Pfam Protein tyrosine and serine/threonine kinase 54 321 IPR001245 GO:0004672|GO:0006468
Amo18g2205 361 SUPERFAMILY Protein kinase-like (PK-like) 37 340 IPR011009 -
Amo18g2205 361 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 347 - -
Amo18g2205 361 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 22 347 - -
Amo18g2205 361 Gene3D Transferase(Phosphotransferase) domain 1 129 329 - -
Amo18g2205 361 Gene3D Phosphorylase Kinase; domain 1 13 128 - -
Amo18g2205 361 ProSiteProfiles Protein kinase domain profile. 53 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2205 Amo-Chr18 67096834 67098391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2205 41 349 Receptor kinase-like Gene Family AT4G05200 53.871 2.53e-119 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g2205 PK_Tyr_Ser-Thr 9.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2205 - - adu:107462330 655.21