Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2197 ATGGTTGAAATGGCAAAGTCTAAATTTGAGTGGTTTAAACATGCCATGGATTGGACTCCTAAATTTCCAACAAAGGATCAAGTAGCTGAGTTGGTGTTAAGGTTTATGATTCTTGGTCTTGGAGTTGTTGCAGCTGTTCTTATTGGAACTGATTCACAAGTGAAGGTGGTTTTCTCCTTTGAGAAGGAAGCTAAATTCACTGATGTTAAGGCTTTGGTATTCTTGGTAGTTGCTAATGGTTTGGCTGCTGGATACTCTTTGATTCAAGAACTTCGTTGTGTTGTGAGTTTGGTTAGGGGAAGTGTTCTCTTCAACAAGCCCTTAGCTTGGGCCATTTTCTATGCTGATCAGAATGACCCAAACAAAACTCCAGCACTATCACGCCACAAGAGAGGATGTAACTATAAGAAATCATTCTACCAAAAGAAATACTGTAAATGCTTTCAGGTTCTAAATTCTGTAGGAGTAGAAACCCAACCAGAAGTAGAAATAGAGGCCTGTGGTAAAGAGTTTATTGAAAATGCATCACGGAAAATTGAAATTCAGAACTCCCACGGGATGTCTAGGTTGGAAATGTTGTTTTTTGGTTAG 591 0.3909 MVEMAKSKFEWFKHAMDWTPKFPTKDQVAELVLRFMILGLGVVAAVLIGTDSQVKVVFSFEKEAKFTDVKALVFLVVANGLAAGYSLIQELRCVVSLVRGSVLFNKPLAWAIFYADQNDPNKTPALSRHKRGCNYKKSFYQKKYCKCFQVLNSVGVETQPEVEIEACGKEFIENASRKIEIQNSHGMSRLEMLFFG* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2197 196 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 25 117 - -
Amo18g2197 196 Pfam Casparian strip membrane protein domain 25 117 IPR006702 -
Amo18g2197 196 PANTHER CASP-LIKE PROTEIN 2B2 25 117 - -
Amo18g2197 196 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 31 117 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2197 Amo-Chr18 66033936 66035619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2197 82 171 CPP Transcription Factor Family AT3G22760 36.697 1.36e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2197 - - ahf:112741278 230.72