Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2172 ATGGCTTCATTCCAAAGCTTCAAATTTGATACCCAAATTCCATCAGAGGTCCTTATATCTCAAATCATGCAACTTCATGCAAGCATCTCCAAGCTAGAATCCCTTAGACCTTCAAAACAAGTCAATAGCCTCTTCACTGACCTAGTGAAACTATGCATCCTCCCTTCATCCATTGAAATTGAGTCTTTACCCCAAGATGTGAAGATAGCTCGCGAGAGCCTCATCGACCTTTGCGGCCGCGCCGAAGGGCTCATGGAGCTTGAGTTCTCAACTTTCATAAGCCACACACCAAACCCTATGAAAAACCTCATACTCTTCCCTTACTATGGCAACTATGTGAAGCTAGCAAACATGGAGAACAAGATCCTCAAGGATAACGGTGTGCCACATCCAAAGAAGGTGGCCTTTGTTGGATCAGGACCAATGCCACTCACTTCCATCATAATGGCCACACACCACATGGAATCAACGCACTTCGACAACTTCGACATCGACGAGAAGGCGAACGAGGTGGCTAGGACGATTGTGGCCTCAGATTCAGGTCTTGAGAAGAGGATGAAGTTTGAAACTCATGACATCATGGATGTGAAAGAGAGGTTGAGCGAATATGATTGCTTATTCTTGGCAGCACTTGTTGGAATGTCAAGAGAAGCAAAACTGAAGATTTTGGGACATATTAGGAAGTACATGAAAGAAGGTGGTTTTTTGCTTGTGAGGAGTGCAAAGGGTGCTAGGGCTTTCTTGTACCCTATTGTTGAAGAACATGACATGGTGGATTTTGAGGTTCTTACCGTATTTCACCCCACAAATGATGTTATCAACTCGGTTGCTCTTCTTCGCAAGCCTAAAGCTTAA 855 0.4433 MASFQSFKFDTQIPSEVLISQIMQLHASISKLESLRPSKQVNSLFTDLVKLCILPSSIEIESLPQDVKIARESLIDLCGRAEGLMELEFSTFISHTPNPMKNLILFPYYGNYVKLANMENKILKDNGVPHPKKVAFVGSGPMPLTSIIMATHHMESTHFDNFDIDEKANEVARTIVASDSGLEKRMKFETHDIMDVKERLSEYDCLFLAALVGMSREAKLKILGHIRKYMKEGGFLLVRSAKGARAFLYPIVEEHDMVDFEVLTVFHPTNDVINSVALLRKPKA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2172 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Amo18g2172 284 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Amo18g2172 284 Gene3D Vaccinia Virus protein VP39 15 283 IPR029063 -
Amo18g2172 284 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Amo18g2172 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 240 IPR029063 -
Amo18g2172 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2172 Amo-Chr18 62763339 62765351 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2172 15 281 Nicotianamine Synthase Gene Family AT5G56080 49.815 3.69e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2172 K05953 - gmx:100819726 466.077