Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2169 ATGGGGGACAATAGCAACAATAATGTTGTTTTGTTGGGCTCAGGGTTCAGCATGTTTGGCATGAGAGCAAGAATAGCATTGGAAGAGAAAGAAATCAAGTATGAGTACAAGGAGGAAGATCTTATCAACAAGAGCTCCTTGCTCTTAGAAATGAATCCAGTTCAAAAGAAAATCCCAGTTCTTATACATAATGGGAGACCAATATGTGAGTCCCTCATAATTGTTGAGTATATTGATATGGTTTGGAACAACAACAATAATAATGCTCCAATGTTGCTTCCTTTTGATCCCTATGACAAAGCGCAAGCCAGATTCTGGGCTGATTTTGTAGATCAGAAGGTGTATCATTTTTCTAGGAGAATATGGACTAATTCCAAGGGAGATGAGCAAGAGTTGGCTAAGAAGGGCTTCATTGAGAGCTTGAAACAATTGGAGGAGTTTCTCGGGGACAAGCCTTATTTTGGAGGGGAGCAATTTGGGTTTGTTGATGTTGCTCTCATCCCTTTCTATTGCTGGTTTTATACATATGAGATGTTTGGAAACTTCAAACTTGAGACATTTTGTCCAAATATCATCTCATGGGCTAATAGATGCATGAAGAGAAAAAGTGTTTCTATAACTCTTGCAGATGGGAAGGAAGTTTATGAGTCTGTTTTGGATTACAAGAATAAGTTTTTGATGGACTAG 687 0.3843 MGDNSNNNVVLLGSGFSMFGMRARIALEEKEIKYEYKEEDLINKSSLLLEMNPVQKKIPVLIHNGRPICESLIIVEYIDMVWNNNNNNAPMLLPFDPYDKAQARFWADFVDQKVYHFSRRIWTNSKGDEQELAKKGFIESLKQLEEFLGDKPYFGGEQFGFVDVALIPFYCWFYTYEMFGNFKLETFCPNIISWANRCMKRKSVSITLADGKEVYESVLDYKNKFLMD* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2169 228 Pfam Glutathione S-transferase, C-terminal domain 133 195 - -
Amo18g2169 228 SFLD Glutathione Transferase (cytosolic) 6 226 IPR040079 -
Amo18g2169 228 SUPERFAMILY GST C-terminal domain-like 89 224 IPR036282 -
Amo18g2169 228 SFLD Main.3: Omega- and Tau-like 6 226 IPR045073 -
Amo18g2169 228 CDD GST_N_Tau 9 82 - -
Amo18g2169 228 PANTHER S-TRANSFERASE TAU 22, PUTATIVE-RELATED 8 223 - -
Amo18g2169 228 SUPERFAMILY Thioredoxin-like 8 115 IPR036249 -
Amo18g2169 228 Gene3D - 96 228 - -
Amo18g2169 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 223 IPR045073 -
Amo18g2169 228 Pfam Glutathione S-transferase, N-terminal domain 15 79 IPR004045 -
Amo18g2169 228 Gene3D Glutaredoxin 5 94 - -
Amo18g2169 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 96 221 IPR010987 -
Amo18g2169 228 CDD GST_C_Tau 97 221 IPR045074 GO:0004364|GO:0006749
Amo18g2169 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2169 Amo-Chr18 62616873 62618567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2169 7 226 Glutathione S-transferase Gene Family AT1G78380 56.364 1.43e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2169 K00799 - gmx:548030 338.961