Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2168 ATGGAGAACGAGGTTGTTCTGTTGGATACATGGCCAAGCATGTTTGGTATGAGGGCTAGGATTGCATTGGCTGAAAAGGGTGCCAATTATGAGTACAAGGAGCAAGATCTTTGGAGCAAGAGTTGTTTGCTTCTTCAGGTGAATCCAATTCACAAGAAGGTTCCAGTTCTGATCATAATGTACATTGATGAGATTTGGAATGACAAATTTCCAATCATGCCCTCGGATCCTTATGAGAGAGCTCAGGTCAGATTTTGGGTTGACTTCATTGACCAAAAGTATAATAATACGTGGATGAAACTATGGCTCTCGGAAGGAGAAGAACATGAAACATGTAAGAAGGAGTTGATCTCTAATTTGAAGCAACTAGAGGATATTTTGGGAGAAAAAGCATTTTATGGCGGTGACACTTTTGGGTTTCTTGATATTTGTCTCATCACATTTTATAGCTGGTTTTATACCTTTGAGAATTACGGCAATTTCAAAATGGAAGCAGAGTGTCCTAAATTGATGGCTTGGGCCAAAAGGTGCATGCAGAGAGACACTGTTTCTAAGTCACTTGTTGATGATAAGAAGGTGTATGATTATGTTGTACAAGCCATAAAGAATGCCTTTGGAAAATAG 624 0.3926 MENEVVLLDTWPSMFGMRARIALAEKGANYEYKEQDLWSKSCLLLQVNPIHKKVPVLIIMYIDEIWNDKFPIMPSDPYERAQVRFWVDFIDQKYNNTWMKLWLSEGEEHETCKKELISNLKQLEDILGEKAFYGGDTFGFLDICLITFYSWFYTFENYGNFKMEAECPKLMAWAKRCMQRDTVSKSLVDDKKVYDYVVQAIKNAFGK* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2168 207 CDD GST_C_Tau 77 197 IPR045074 GO:0004364|GO:0006749
Amo18g2168 207 Pfam Glutathione S-transferase, N-terminal domain 6 59 IPR004045 -
Amo18g2168 207 SUPERFAMILY GST C-terminal domain-like 64 201 IPR036282 -
Amo18g2168 207 SFLD Glutathione Transferase (cytosolic) 2 202 IPR040079 -
Amo18g2168 207 Pfam Glutathione S-transferase, C-terminal domain 112 176 - -
Amo18g2168 207 Gene3D Glutaredoxin 1 75 - -
Amo18g2168 207 SUPERFAMILY Thioredoxin-like 4 93 IPR036249 -
Amo18g2168 207 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 98 IPR004045 -
Amo18g2168 207 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 76 205 IPR010987 -
Amo18g2168 207 PANTHER GLUTATHIONE S-TRANSFERASE PARC-RELATED 3 198 - -
Amo18g2168 207 SFLD Main.3: Omega- and Tau-like 2 202 IPR045073 -
Amo18g2168 207 Gene3D - 76 206 - -
Amo18g2168 207 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 198 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2168 Amo-Chr18 62607008 62608142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2168 1 203 Glutathione S-transferase Gene Family AT1G17180 54.419 7.48e-87 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2168 K00799 - gmx:106796199 301.982