Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2122 ATGAGTTTGATGCTTCATCACGTATCAATGTTGCCACATGAGGCTGTATCTTGTAAACTGAGGCTTGCTGGAGCATTAGCAAGATCTCATTCCTTTTCTGCATCTTGTTCTGTCACCAATAGAGCAATCCATTGCACCCCGAAAAGGTGGAGCTGCAGTGGCAGTTGTATTGGAGTTAGTATTAGTAGTAGTAGTAGATGCAACTACCAAGGGAAAAGGCTTGTTAGAAGCTGCTCCACCACCAGTGACTTTGTAATTGCCGGTGACGGAAGTTATGGCAACAAGCAGGTTGTTAGTCTCACTCCGCGCTTGTATGACTATGTGCTAAAAAATGTTAGAGAACCTGAGATTTTAAGGCAACTGCGCGAGGAGACAGCCTCTATGCGTGGAAGTCAGATGCAGGTATCTCCTGATCAGGCACAATTACTTGCAATGCTTGTGCAGACTCTTGGAGCCGAACGGTGCATTGAAGTCGGTGTTTATACTGGCTACTCATCACTGGCCATAGCATTAATCTTGCAAGAATCAGGTCGTTTGGTTGCATGTGAAAGAGATGCCAAATCTCTTGATATTGCCAAGAAGTACTATCACCTAGCTGGTGTTTCACATAAGGTCTATGCAACACTTGAAAGTTTCTAG 639 0.4444 MSLMLHHVSMLPHEAVSCKLRLAGALARSHSFSASCSVTNRAIHCTPKRWSCSGSCIGVSISSSSRCNYQGKRLVRSCSTTSDFVIAGDGSYGNKQVVSLTPRLYDYVLKNVREPEILRQLREETASMRGSQMQVSPDQAQLLAMLVQTLGAERCIEVGVYTGYSSLAIALILQESGRLVACERDAKSLDIAKKYYHLAGVSHKVYATLESF* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2122 212 PANTHER O-METHYLTRANSFERASE-RELATED 83 206 - -
Amo18g2122 212 Pfam O-methyltransferase 112 205 IPR002935 GO:0008171
Amo18g2122 212 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 83 206 - -
Amo18g2122 212 Gene3D Vaccinia Virus protein VP39 91 209 IPR029063 -
Amo18g2122 212 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 107 205 IPR029063 -
Amo18g2122 212 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 94 212 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2122 Amo-Chr18 59090339 59092987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2122 72 205 Monolignol Biosynthesis Gene Families AT3G62000 76.471 3.03e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2122 - - lja:Lj3g3v1048910.1 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2122 18 59090339 59092987 Amo07g2135 07 65313770 65317042 hybridization