Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2121 ATGGCGTTTTCAACCCCGGAAGGTGGATCGATTAGTACATTGATCAATCCAACACAAGGCGATGAACGATTCAGTGTGGGTGAAGTAGTTATTCAAGAGCAAGAAGGGTCGAAGGTCGACGAAATTACCGACGTCGTTGTGACTAGAAAGGATGAGTTAGACTACGGACACGAGTTGTCGAATCATAGTGGCGTCGGTGAAGATAAAATTCCAGTCATAGGAATGAGTTTTGGTTCGTTGCCTCTTGCACAGAAATTTTATGCAAACTATGCAAAGAAAGTTGGGTTTGTTACTAAAATCAGGAACACAAATTTCGACAAGACGCGGAAGAAATCAAAGATACCGGTTAATCAATCTATTTACTCCACGCGAGAAGGTTATCGAGAGTCTAGGGTGAACGCAGCAACTCGAGCAAATAGAATTACAGCCATGAGATGCAGAGAAAGGATGTATGTCATGCTGGACAAGGAGAAGGAAAGTTGGGTTGTGTCTAGATTAGAATTAAGGCATTCTCACCGCTGTTCGGCTAAGAAAGCTGTCCACTATCATGAGTACCGGGAGCTAACCATGCATGTTAAGTGTGTCATTACGGATAACTACGAGGCTGGAATAAGACCCAACAAGACATTTCTAGCACTGGCAAACGAGGTTGTACCGAGCTGCTATGTTCTTCCTCGATGGAGTACGAATGTCATCCGCAAGCACACTTACATCAAGAGTAGCCATGACGTGGCTCAGAGTGATGAAAGCAACAACTTGTTCAGGCATCTGTGTTCAGAGTTCTATAATGTTGCTCAGGAGTTTGTTGCTTGTGAGGAGGAAGCAACCATCTTGCGAGCTGCCTTTTGGGATGCAAAGGCTAAGCTGACTGATTACCGTGCCAGCATGCATTCCACTACTATTGCTGCGACTCAGAATACCATGCCCACACAAAGCACAGGCGGTGCTATTGTACATGACATACGGGGACCCTCAAGAGTCAAAACTAAAGGACGGCCGAAGAGTAAGAGACTTGGAGTAGAGTTGGACAAGTCAATTAAGAAGTCAATGCAAAAAAAGGAAGAGGAAATCACATCCGATTAG 1083 0.4469 MAFSTPEGGSISTLINPTQGDERFSVGEVVIQEQEGSKVDEITDVVVTRKDELDYGHELSNHSGVGEDKIPVIGMSFGSLPLAQKFYANYAKKVGFVTKIRNTNFDKTRKKSKIPVNQSIYSTREGYRESRVNAATRANRITAMRCRERMYVMLDKEKESWVVSRLELRHSHRCSAKKAVHYHEYRELTMHVKCVITDNYEAGIRPNKTFLALANEVVPSCYVLPRWSTNVIRKHTYIKSSHDVAQSDESNNLFRHLCSEFYNVAQEFVACEEEATILRAAFWDAKAKLTDYRASMHSTTIAATQNTMPTQSTGGAIVHDIRGPSRVKTKGRPKSKRLGVELDKSIKKSMQKKEEEITSD* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2121 360 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 227 - -
Amo18g2121 360 Pfam FAR1 DNA-binding domain 85 174 IPR004330 -
Amo18g2121 360 MobiDBLite consensus disorder prediction 307 360 - -
Amo18g2121 360 MobiDBLite consensus disorder prediction 334 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2121 Amo-Chr18 59072336 59077050 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g2121 FAR1 9.3e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2121 - - ahf:112730161 353.984