Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2119 ATGGTTTTGCAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGGTCTATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAGGGTCACATTGAATTGTTGCCAGAACCTACAGAACAAGATTTGAGGCAGATGAAGAACCAGAAATCTCCCAAATACGATCTTCCGTCGAACAAGATATTTAAAGAACAAGATTTTTTTCTCATCTATCAGAAGGTTAATAATTTTTATTAG 357 0.381 MVLQIDEELLQEVVNMGFDRNQLVESLCNRIQNEVYGAGDDLFKELWRLCAGPLMDVPCVQDRVFYFPQGHIELLPEPTEQDLRQMKNQKSPKYDLPSNKIFKEQDFFLIYQKVNNFY* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2119 118 CDD UBA_SnRK1_plant 5 35 - -
Amo18g2119 118 Pfam UBA/TS-N domain 5 34 IPR015940 -
Amo18g2119 118 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 4 45 IPR015940 -
Amo18g2119 118 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 32 99 IPR044835 GO:0003677|GO:0006355|GO:0009725
Amo18g2119 118 PANTHER AUXIN RESPONSE FACTOR 11 32 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2119 Amo-Chr18 58804445 58805466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2119 38 97 B3 DNA Binding Superfamily AT4G23980 55.738 1.30e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2119 K14486 - ahf:114925841 203.371